Cluster: CGMR067593_CGC16
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR067593
- CGC Family ID: CGCFAM_00089
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_141393 | k141_141393_174 | 179663 | 182203 | - | 1.B.78.1.5 |
| TC | k141_141393 | k141_141393_175 | 182216 | 183259 | - | 5.B.5.1.1 |
| pfam | k141_141393 | k141_141393_176 | 183440 | 185782 | - | S1 | Tex_N | HHH_3 | HHH_7 | Tex_YqgF | HHH_9 | Tex_central_region | S1_RRP5 |
| pfam | k141_141393 | k141_141393_177 | 185891 | 186859 | - | DUF3829 |
| CAZyme | k141_141393 | k141_141393_178 | 186962 | 187672 | - | GT2 |
Gene ID: k141_141393_174
Type: TC
Location: 179663 - 182203 (-)
Type: TC
Location: 179663 - 182203 (-)
Gene ID: k141_141393_175
Type: TC
Location: 182216 - 183259 (-)
Type: TC
Location: 182216 - 183259 (-)
Gene ID: k141_141393_176
Type: pfam
Location: 183440 - 185782 (-)
Type: pfam
Location: 183440 - 185782 (-)
Gene ID: k141_141393_177
Type: pfam
Location: 185891 - 186859 (-)
Type: pfam
Location: 185891 - 186859 (-)
Gene ID: k141_141393_178
Type: CAZyme
Location: 186962 - 187672 (-)
Type: CAZyme
Location: 186962 - 187672 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Xanthomonadales
Family
Xanthomonadaceae
Genus
Pseudoxanthomonas_B
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.