Cluster: CGMR067593_CGC14
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: CGMR067593
- CGC Family ID: CGCFAM_01451
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_87578 | k141_87578_59 | 62697 | 63701 | - | GT2 |
| CAZyme | k141_87578 | k141_87578_60 | 63733 | 64452 | - | GT51 |
| pfam | k141_87578 | k141_87578_61 | 64494 | 65444 | + | HSP33 |
| NULL(UNKNOWN) | k141_87578 | k141_87578_62 | 65565 | 66437 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | k141_87578 | k141_87578_63 | 66742 | 69318 | + | 1.B.14.3.1 |
Gene ID: k141_87578_59
Type: CAZyme
Location: 62697 - 63701 (-)
Type: CAZyme
Location: 62697 - 63701 (-)
Gene ID: k141_87578_60
Type: CAZyme
Location: 63733 - 64452 (-)
Type: CAZyme
Location: 63733 - 64452 (-)
Gene ID: k141_87578_61
Type: pfam
Location: 64494 - 65444 (+)
Type: pfam
Location: 64494 - 65444 (+)
Gene ID: k141_87578_62
Type:
Location: 65565 - 66437 (+)
Type:
Location: 65565 - 66437 (+)
Gene ID: k141_87578_63
Type: TC
Location: 66742 - 69318 (+)
Type: TC
Location: 66742 - 69318 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Xanthomonadales
Family
Xanthomonadaceae
Genus
Pseudoxanthomonas_B
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.