Cluster: CGMR067593_CGC12
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR067593
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_83367 | k141_83367_53 | 49274 | 50485 | + | 2.A.37.2.2 |
| NULL(UNKNOWN) | k141_83367 | k141_83367_54 | 50552 | 51433 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | k141_83367 | k141_83367_55 | 51523 | 52308 | + | GH23 |
| sulfatase | k141_83367 | k141_83367_56 | 52364 | 53545 | - | S1_8 |
| TC | k141_83367 | k141_83367_57 | 53612 | 54862 | - | 2.A.23.1.7 |
Gene ID: k141_83367_53
Type: TC
Location: 49274 - 50485 (+)
Type: TC
Location: 49274 - 50485 (+)
Gene ID: k141_83367_54
Type:
Location: 50552 - 51433 (+)
Type:
Location: 50552 - 51433 (+)
Gene ID: k141_83367_55
Type: CAZyme
Location: 51523 - 52308 (+)
Type: CAZyme
Location: 51523 - 52308 (+)
Gene ID: k141_83367_56
Type: sulfatase
Location: 52364 - 53545 (-)
Type: sulfatase
Location: 52364 - 53545 (-)
Gene ID: k141_83367_57
Type: TC
Location: 53612 - 54862 (-)
Type: TC
Location: 53612 - 54862 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Xanthomonadales
Family
Xanthomonadaceae
Genus
Pseudoxanthomonas_B
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.