Cluster: CGMR067593_CGC11
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR067593
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_83367 | k141_83367_27 | 23409 | 26267 | + | 5.A.3.11.2 |
| NULL(UNKNOWN) | k141_83367 | k141_83367_28 | 26267 | 26512 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | k141_83367 | k141_83367_29 | 26509 | 27255 | + | 5.A.3.11.2 |
| pfam | k141_83367 | k141_83367_30 | 27255 | 28214 | + | DmsC |
| pfam | k141_83367 | k141_83367_31 | 28208 | 30016 | - | DUF885 |
| TC | k141_83367 | k141_83367_32 | 30066 | 30440 | - | 2.A.123.4.3 |
| CAZyme | k141_83367 | k141_83367_33 | 30437 | 31165 | - | GT2 |
Gene ID: k141_83367_27
Type: TC
Location: 23409 - 26267 (+)
Type: TC
Location: 23409 - 26267 (+)
Gene ID: k141_83367_28
Type:
Location: 26267 - 26512 (+)
Type:
Location: 26267 - 26512 (+)
Gene ID: k141_83367_29
Type: TC
Location: 26509 - 27255 (+)
Type: TC
Location: 26509 - 27255 (+)
Gene ID: k141_83367_30
Type: pfam
Location: 27255 - 28214 (+)
Type: pfam
Location: 27255 - 28214 (+)
Gene ID: k141_83367_31
Type: pfam
Location: 28208 - 30016 (-)
Type: pfam
Location: 28208 - 30016 (-)
Gene ID: k141_83367_32
Type: TC
Location: 30066 - 30440 (-)
Type: TC
Location: 30066 - 30440 (-)
Gene ID: k141_83367_33
Type: CAZyme
Location: 30437 - 31165 (-)
Type: CAZyme
Location: 30437 - 31165 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Xanthomonadales
Family
Xanthomonadaceae
Genus
Pseudoxanthomonas_B
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.