Cluster: CGMR067593_CGC1
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR067593
- CGC Family ID: CGCFAM_02192
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_43928 | k141_43928_6 | 6401 | 7261 | + | GH23 |
| TC | k141_43928 | k141_43928_7 | 7391 | 8020 | + | 3.E.2.1.1 |
| TC | k141_43928 | k141_43928_8 | 8017 | 9282 | + | 3.D.3.1.1 |
| pfam | k141_43928 | k141_43928_9 | 9275 | 10078 | + | Cytochrom_C1 | Cytochrom_C1 |
| TC | k141_43928 | k141_43928_10 | 10214 | 10834 | + | 1.A.12.3.1 |
Gene ID: k141_43928_6
Type: CAZyme
Location: 6401 - 7261 (+)
Type: CAZyme
Location: 6401 - 7261 (+)
Gene ID: k141_43928_7
Type: TC
Location: 7391 - 8020 (+)
Type: TC
Location: 7391 - 8020 (+)
Gene ID: k141_43928_8
Type: TC
Location: 8017 - 9282 (+)
Type: TC
Location: 8017 - 9282 (+)
Gene ID: k141_43928_9
Type: pfam
Location: 9275 - 10078 (+)
Type: pfam
Location: 9275 - 10078 (+)
Gene ID: k141_43928_10
Type: TC
Location: 10214 - 10834 (+)
Type: TC
Location: 10214 - 10834 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Xanthomonadales
Family
Xanthomonadaceae
Genus
Pseudoxanthomonas_B
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.