Cluster: CGMR067558_CGC6
🧬 Cluster Details
- Gene Count: 13
- CAZyme Count: 2
- Substrate:
- Genome ID: CGMR067558
- CGC Family ID: CGCFAM_05738
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_20580 | k141_20580_17 | 16855 | 18537 | + | 3.A.1.120.6 |
| pfam | k141_20580 | k141_20580_18 | 18670 | 19626 | - | Acyl_CoA_thio | 4HBT_3 | 4HBT_3C |
| pfam | k141_20580 | k141_20580_19 | 19729 | 20052 | + | PTS_EIIB |
| CAZyme | k141_20580 | k141_20580_20 | 20096 | 22219 | + | GH77 |
| TC | k141_20580 | k141_20580_21 | 22223 | 22699 | - | 4.A.1.1.1 |
| TC | k141_20580 | k141_20580_22 | 22696 | 22926 | - | 4.A.1.1.5 |
| CAZyme | k141_20580 | k141_20580_23 | 23052 | 24059 | + | GT2 |
| NULL(UNKNOWN) | k141_20580 | k141_20580_24 | 24141 | 26537 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | k141_20580 | k141_20580_25 | 26498 | 28162 | + | 3.A.1.15.15 |
| NULL(UNKNOWN) | k141_20580 | k141_20580_26 | 28159 | 29124 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | k141_20580 | k141_20580_27 | 29124 | 29879 | + | 3.A.1.15.1 |
| TC | k141_20580 | k141_20580_28 | 29880 | 30719 | + | 3.A.1.15.4 |
| TC | k141_20580 | k141_20580_29 | 30789 | 31358 | + | 2.A.22.4.3 |
Gene ID: k141_20580_17
Type: TC
Location: 16855 - 18537 (+)
Type: TC
Location: 16855 - 18537 (+)
Gene ID: k141_20580_18
Type: pfam
Location: 18670 - 19626 (-)
Type: pfam
Location: 18670 - 19626 (-)
Gene ID: k141_20580_19
Type: pfam
Location: 19729 - 20052 (+)
Type: pfam
Location: 19729 - 20052 (+)
Gene ID: k141_20580_20
Type: CAZyme
Location: 20096 - 22219 (+)
Type: CAZyme
Location: 20096 - 22219 (+)
Gene ID: k141_20580_21
Type: TC
Location: 22223 - 22699 (-)
Type: TC
Location: 22223 - 22699 (-)
Gene ID: k141_20580_22
Type: TC
Location: 22696 - 22926 (-)
Type: TC
Location: 22696 - 22926 (-)
Gene ID: k141_20580_23
Type: CAZyme
Location: 23052 - 24059 (+)
Type: CAZyme
Location: 23052 - 24059 (+)
Gene ID: k141_20580_24
Type:
Location: 24141 - 26537 (+)
Type:
Location: 24141 - 26537 (+)
Gene ID: k141_20580_25
Type: TC
Location: 26498 - 28162 (+)
Type: TC
Location: 26498 - 28162 (+)
Gene ID: k141_20580_26
Type:
Location: 28159 - 29124 (+)
Type:
Location: 28159 - 29124 (+)
Gene ID: k141_20580_27
Type: TC
Location: 29124 - 29879 (+)
Type: TC
Location: 29124 - 29879 (+)
Gene ID: k141_20580_28
Type: TC
Location: 29880 - 30719 (+)
Type: TC
Location: 29880 - 30719 (+)
Gene ID: k141_20580_29
Type: TC
Location: 30789 - 31358 (+)
Type: TC
Location: 30789 - 31358 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Actinomycetaceae
Genus
Pauljensenia
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.