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Cluster: CGMR067558_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_21230 k141_21230_1 2 1468 + 3.A.1.5.41
TC k141_21230 k141_21230_2 1804 2727 + 3.A.1.5.35
TC k141_21230 k141_21230_3 2720 3688 + 3.A.1.5.35
TC k141_21230 k141_21230_4 3685 5655 + 3.A.1.5.23
TF k141_21230 k141_21230_5 5747 6850 - LacI
CAZyme k141_21230 k141_21230_6 6992 8917 + GH2
TC k141_21230 k141_21230_7 8910 9980 + 3.A.1.1.36
TC k141_21230 k141_21230_8 9982 10809 + 3.A.1.1.36
STP k141_21230 k141_21230_9 10930 12312 + SBP_bac_1
CAZyme k141_21230 k141_21230_10 12830 16804 + GH85
Gene ID: k141_21230_1
Type: TC
Location: 2 - 1468 (+)
Gene ID: k141_21230_2
Type: TC
Location: 1804 - 2727 (+)
Gene ID: k141_21230_3
Type: TC
Location: 2720 - 3688 (+)
Gene ID: k141_21230_4
Type: TC
Location: 3685 - 5655 (+)
Gene ID: k141_21230_5
Type: TF
Location: 5747 - 6850 (-)
Gene ID: k141_21230_6
Type: CAZyme
Location: 6992 - 8917 (+)
Gene ID: k141_21230_7
Type: TC
Location: 8910 - 9980 (+)
Gene ID: k141_21230_8
Type: TC
Location: 9982 - 10809 (+)
Gene ID: k141_21230_9
Type: STP
Location: 10930 - 12312 (+)
Gene ID: k141_21230_10
Type: CAZyme
Location: 12830 - 16804 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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