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Cluster: CGMR067558_CGC18

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_17183 k141_17183_1 3 557 + 3.A.1.19.3
pfam k141_17183 k141_17183_2 567 1301 + Methyltransf_11 | Methyltransf_12 | Methyltransf_23 | Methyltransf_25
pfam k141_17183 k141_17183_3 1323 3035 + Abhydrolase_9 | Abhydrolase_9_N
CAZyme k141_17183 k141_17183_4 3042 4244 - GH20
TF k141_17183 k141_17183_5 4334 5473 + 0040517
STP k141_17183 k141_17183_6 5566 6870 + SBP_bac_1
TC k141_17183 k141_17183_7 6997 7935 + 3.A.1.1.33
TC k141_17183 k141_17183_8 7932 8822 + 3.A.1.1.33
pfam k141_17183 k141_17183_9 8880 11501 - LPG_synthase_TM
TC k141_17183 k141_17183_10 11600 12304 + 9.B.27.2.3
Gene ID: k141_17183_1
Type: TC
Location: 3 - 557 (+)
Gene ID: k141_17183_2
Type: pfam
Location: 567 - 1301 (+)
Gene ID: k141_17183_3
Type: pfam
Location: 1323 - 3035 (+)
Gene ID: k141_17183_4
Type: CAZyme
Location: 3042 - 4244 (-)
Gene ID: k141_17183_5
Type: TF
Location: 4334 - 5473 (+)
Gene ID: k141_17183_6
Type: STP
Location: 5566 - 6870 (+)
Gene ID: k141_17183_7
Type: TC
Location: 6997 - 7935 (+)
Gene ID: k141_17183_8
Type: TC
Location: 7932 - 8822 (+)
Gene ID: k141_17183_9
Type: pfam
Location: 8880 - 11501 (-)
Gene ID: k141_17183_10
Type: TC
Location: 11600 - 12304 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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