Cluster: CGMR067390_CGC67
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 2
- Substrate:
- Genome ID: CGMR067390
- CGC Family ID: CGCFAM_00426
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_160525 | k141_160525_87 | 90166 | 91467 | + | 2.A.1.14.2 |
| CAZyme | k141_160525 | k141_160525_88 | 91485 | 93848 | + | GH31_2 |
| TC | k141_160525 | k141_160525_89 | 93924 | 95519 | - | 3.A.1.121.4 |
| peptidase | k141_160525 | k141_160525_90 | 95675 | 96661 | + | C82.UPB |
| TF | k141_160525 | k141_160525_91 | 96732 | 97448 | - | GntR |
| TC | k141_160525 | k141_160525_92 | 97464 | 98786 | - | 4.A.3.2.9 |
| CAZyme | k141_160525 | k141_160525_93 | 98838 | 100214 | - | GH1 |
| TC | k141_160525 | k141_160525_94 | 100363 | 101403 | - | 8.A.5.1.3 |
| TC | k141_160525 | k141_160525_95 | 101510 | 103030 | - | 1.B.17.3.8 |
| TC | k141_160525 | k141_160525_96 | 103030 | 104601 | - | 2.A.1.3.2 |
| TC | k141_160525 | k141_160525_97 | 104598 | 105692 | - | 8.A.1.1.2 |
| TC | k141_160525 | k141_160525_98 | 105794 | 106903 | - | 2.A.45.2.5 |
Gene ID: k141_160525_87
Type: TC
Location: 90166 - 91467 (+)
Type: TC
Location: 90166 - 91467 (+)
Gene ID: k141_160525_88
Type: CAZyme
Location: 91485 - 93848 (+)
Type: CAZyme
Location: 91485 - 93848 (+)
Gene ID: k141_160525_89
Type: TC
Location: 93924 - 95519 (-)
Type: TC
Location: 93924 - 95519 (-)
Gene ID: k141_160525_90
Type: peptidase
Location: 95675 - 96661 (+)
Type: peptidase
Location: 95675 - 96661 (+)
Gene ID: k141_160525_91
Type: TF
Location: 96732 - 97448 (-)
Type: TF
Location: 96732 - 97448 (-)
Gene ID: k141_160525_92
Type: TC
Location: 97464 - 98786 (-)
Type: TC
Location: 97464 - 98786 (-)
Gene ID: k141_160525_93
Type: CAZyme
Location: 98838 - 100214 (-)
Type: CAZyme
Location: 98838 - 100214 (-)
Gene ID: k141_160525_94
Type: TC
Location: 100363 - 101403 (-)
Type: TC
Location: 100363 - 101403 (-)
Gene ID: k141_160525_95
Type: TC
Location: 101510 - 103030 (-)
Type: TC
Location: 101510 - 103030 (-)
Gene ID: k141_160525_96
Type: TC
Location: 103030 - 104601 (-)
Type: TC
Location: 103030 - 104601 (-)
Gene ID: k141_160525_97
Type: TC
Location: 104598 - 105692 (-)
Type: TC
Location: 104598 - 105692 (-)
Gene ID: k141_160525_98
Type: TC
Location: 105794 - 106903 (-)
Type: TC
Location: 105794 - 106903 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Enterobacter
Species
Enterobacter ludwigii
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_160525_87 | vegetarian > omnivore | 1.62408 | 0.03240 |
| k141_160525_94 | vegetarian > omnivore | 1.68469 | 0.03240 |
| k141_160525_95 | vegetarian > omnivore | 1.47251 | 0.03240 |
| k141_160525_98 | vegetarian > vegan | 1.47691 | 0.03740 |