Cluster: CGMR067390_CGC66
🧬 Cluster Details
- Gene Count: 14
- CAZyme Count: 3
- Substrate:
- Genome ID: CGMR067390
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_160525 | k141_160525_18 | 20073 | 21902 | - | CBM73 | GH19 |
| CAZyme | k141_160525 | k141_160525_19 | 22047 | 22487 | - | GH23 |
| CAZyme | k141_160525 | k141_160525_20 | 22625 | 25276 | - | GH18 |
| TC | k141_160525 | k141_160525_21 | 25537 | 26334 | - | 3.A.15.2.1 |
| pfam | k141_160525 | k141_160525_22 | 26331 | 26816 | - | T2SSM |
| pfam | k141_160525 | k141_160525_23 | 26813 | 27946 | - | T2SSL | GspL_C |
| TC | k141_160525 | k141_160525_24 | 27962 | 28972 | - | 3.A.15.1.1 |
| TC | k141_160525 | k141_160525_25 | 28969 | 29592 | - | 3.A.15.1.1 |
| pfam | k141_160525 | k141_160525_26 | 29589 | 29939 | - | T2SSI |
| TC | k141_160525 | k141_160525_27 | 29962 | 30447 | - | 3.A.15.1.1 |
| TC | k141_160525 | k141_160525_28 | 30447 | 30896 | - | 3.A.15.1.1 |
| TC | k141_160525 | k141_160525_29 | 30900 | 32108 | - | 3.A.15.1.1 |
| TC | k141_160525 | k141_160525_30 | 32108 | 33586 | - | 3.A.15.1.1 |
| TC | k141_160525 | k141_160525_31 | 33601 | 35517 | - | 1.B.22.1.1 |
Gene ID: k141_160525_18
Type: CAZyme
Location: 20073 - 21902 (-)
Type: CAZyme
Location: 20073 - 21902 (-)
Gene ID: k141_160525_19
Type: CAZyme
Location: 22047 - 22487 (-)
Type: CAZyme
Location: 22047 - 22487 (-)
Gene ID: k141_160525_20
Type: CAZyme
Location: 22625 - 25276 (-)
Type: CAZyme
Location: 22625 - 25276 (-)
Gene ID: k141_160525_21
Type: TC
Location: 25537 - 26334 (-)
Type: TC
Location: 25537 - 26334 (-)
Gene ID: k141_160525_22
Type: pfam
Location: 26331 - 26816 (-)
Type: pfam
Location: 26331 - 26816 (-)
Gene ID: k141_160525_23
Type: pfam
Location: 26813 - 27946 (-)
Type: pfam
Location: 26813 - 27946 (-)
Gene ID: k141_160525_24
Type: TC
Location: 27962 - 28972 (-)
Type: TC
Location: 27962 - 28972 (-)
Gene ID: k141_160525_25
Type: TC
Location: 28969 - 29592 (-)
Type: TC
Location: 28969 - 29592 (-)
Gene ID: k141_160525_26
Type: pfam
Location: 29589 - 29939 (-)
Type: pfam
Location: 29589 - 29939 (-)
Gene ID: k141_160525_27
Type: TC
Location: 29962 - 30447 (-)
Type: TC
Location: 29962 - 30447 (-)
Gene ID: k141_160525_28
Type: TC
Location: 30447 - 30896 (-)
Type: TC
Location: 30447 - 30896 (-)
Gene ID: k141_160525_29
Type: TC
Location: 30900 - 32108 (-)
Type: TC
Location: 30900 - 32108 (-)
Gene ID: k141_160525_30
Type: TC
Location: 32108 - 33586 (-)
Type: TC
Location: 32108 - 33586 (-)
Gene ID: k141_160525_31
Type: TC
Location: 33601 - 35517 (-)
Type: TC
Location: 33601 - 35517 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Enterobacter
Species
Enterobacter ludwigii
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_160525_18 | vegetarian > omnivore | 1.05626 | 0.03240 |
| k141_160525_22 | vegetarian > omnivore | 1.97265 | 0.03240 |
| k141_160525_22 | vegetarian > vegan | 2.16567 | 0.03740 |
| k141_160525_23 | vegetarian > omnivore | 2.23480 | 0.03240 |
| k141_160525_24 | vegetarian > omnivore | 1.89386 | 0.03240 |
| k141_160525_26 | vegetarian > omnivore | 1.74002 | 0.03240 |
| k141_160525_27 | vegetarian > omnivore | 2.30015 | 0.03240 |
| k141_160525_28 | vegetarian > omnivore | 3.30070 | 0.03240 |
| k141_160525_29 | vegetarian > omnivore | 1.34501 | 0.03240 |