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Cluster: CGMR067390_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_6170 k141_6170_118 133486 133941 + 3.D.1.9.2
STP k141_6170 k141_6170_119 133946 135202 - Aminotran_1_2
CAZyme k141_6170 k141_6170_120 135383 137413 - GH13_19
CAZyme k141_6170 k141_6170_121 137728 138552 + GH73
TF k141_6170 k141_6170_122 138601 139779 - HTH_AraC | HTH_AraC
TC k141_6170 k141_6170_123 139813 140994 - 3.A.1.2.4
TC k141_6170 k141_6170_124 140972 142513 - 3.A.1.2.4
TC k141_6170 k141_6170_125 142585 143577 - 3.A.1.2.4
Gene ID: k141_6170_118
Type: TC
Location: 133486 - 133941 (+)
Gene ID: k141_6170_119
Type: STP
Location: 133946 - 135202 (-)
Gene ID: k141_6170_120
Type: CAZyme
Location: 135383 - 137413 (-)
Gene ID: k141_6170_121
Type: CAZyme
Location: 137728 - 138552 (+)
Gene ID: k141_6170_122
Type: TF
Location: 138601 - 139779 (-)
Gene ID: k141_6170_123
Type: TC
Location: 139813 - 140994 (-)
Gene ID: k141_6170_124
Type: TC
Location: 140972 - 142513 (-)
Gene ID: k141_6170_125
Type: TC
Location: 142585 - 143577 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_6170_120 vegetarian > omnivore 1.43087 0.03240

🧭 Explore Read Mapping of CGC

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