Cluster: CGMR067390_CGC55
🧬 Cluster Details
- Gene Count: 10
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR067390
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_6920 | k141_6920_41 | 43069 | 43869 | + | 3.A.1.13.1 |
| TC | k141_6920 | k141_6920_42 | 43897 | 44520 | + | 1.A.62.2.2 |
| pfam | k141_6920 | k141_6920_43 | 44577 | 44921 | - | Fe-S_biosyn |
| TC | k141_6920 | k141_6920_44 | 45007 | 46407 | - | 2.A.49.5.5 |
| pfam | k141_6920 | k141_6920_45 | 46584 | 47864 | + | Aminotran_3 |
| TC | k141_6920 | k141_6920_46 | 47921 | 49903 | - | 3.A.1.14.3 |
| TC | k141_6920 | k141_6920_47 | 49900 | 50790 | - | 3.A.1.14.3 |
| TC | k141_6920 | k141_6920_48 | 50790 | 51587 | - | 3.A.1.14.3 |
| TC | k141_6920 | k141_6920_49 | 51638 | 53857 | - | 1.B.14.1.2 |
| CAZyme | k141_6920 | k141_6920_50 | 54087 | 56612 | - | GT51 |
Gene ID: k141_6920_41
Type: TC
Location: 43069 - 43869 (+)
Type: TC
Location: 43069 - 43869 (+)
Gene ID: k141_6920_42
Type: TC
Location: 43897 - 44520 (+)
Type: TC
Location: 43897 - 44520 (+)
Gene ID: k141_6920_43
Type: pfam
Location: 44577 - 44921 (-)
Type: pfam
Location: 44577 - 44921 (-)
Gene ID: k141_6920_44
Type: TC
Location: 45007 - 46407 (-)
Type: TC
Location: 45007 - 46407 (-)
Gene ID: k141_6920_45
Type: pfam
Location: 46584 - 47864 (+)
Type: pfam
Location: 46584 - 47864 (+)
Gene ID: k141_6920_46
Type: TC
Location: 47921 - 49903 (-)
Type: TC
Location: 47921 - 49903 (-)
Gene ID: k141_6920_47
Type: TC
Location: 49900 - 50790 (-)
Type: TC
Location: 49900 - 50790 (-)
Gene ID: k141_6920_48
Type: TC
Location: 50790 - 51587 (-)
Type: TC
Location: 50790 - 51587 (-)
Gene ID: k141_6920_49
Type: TC
Location: 51638 - 53857 (-)
Type: TC
Location: 51638 - 53857 (-)
Gene ID: k141_6920_50
Type: CAZyme
Location: 54087 - 56612 (-)
Type: CAZyme
Location: 54087 - 56612 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Enterobacter
Species
Enterobacter ludwigii
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_6920_43 | vegetarian > vegan | 1.12308 | 0.03740 |
| k141_6920_44 | vegetarian > vegan | 1.15325 | 0.03740 |
| k141_6920_47 | vegetarian > omnivore | 1.81538 | 0.03240 |
| k141_6920_47 | vegetarian > vegan | 1.22190 | 0.03740 |