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Cluster: CGMR067390_CGC53

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_63464 k141_63464_141 144783 147167 - GH20
TC k141_63464 k141_63464_142 147318 150026 - 3.A.3.4.1
TF k141_63464 k141_63464_143 150419 151366 + LacI
TC k141_63464 k141_63464_144 151495 152913 + 4.A.1.2.4
CAZyme k141_63464 k141_63464_145 152965 154620 + GH13_29
pfam k141_63464 k141_63464_146 154754 155500 + KdgM
TF k141_63464 k141_63464_147 155509 156168 - HTH_6
TC k141_63464 k141_63464_148 156348 157745 + 4.A.2.1.11
CAZyme k141_63464 k141_63464_149 157756 160353 + GH38
TC k141_63464 k141_63464_150 160355 160927 + 4.A.2.1.3
Gene ID: k141_63464_141
Type: CAZyme
Location: 144783 - 147167 (-)
Gene ID: k141_63464_142
Type: TC
Location: 147318 - 150026 (-)
Gene ID: k141_63464_143
Type: TF
Location: 150419 - 151366 (+)
Gene ID: k141_63464_144
Type: TC
Location: 151495 - 152913 (+)
Gene ID: k141_63464_145
Type: CAZyme
Location: 152965 - 154620 (+)
Gene ID: k141_63464_146
Type: pfam
Location: 154754 - 155500 (+)
Gene ID: k141_63464_147
Type: TF
Location: 155509 - 156168 (-)
Gene ID: k141_63464_148
Type: TC
Location: 156348 - 157745 (+)
Gene ID: k141_63464_149
Type: CAZyme
Location: 157756 - 160353 (+)
Gene ID: k141_63464_150
Type: TC
Location: 160355 - 160927 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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