Cluster: CGMR067390_CGC44
🧬 Cluster Details
- Gene Count: 13
- CAZyme Count: 3
- Substrate:
- Genome ID: CGMR067390
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_149013 | k141_149013_735 | 798832 | 799578 | - | GT2 |
| NULL(UNKNOWN) | k141_149013 | k141_149013_736 | 799595 | 800815 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | k141_149013 | k141_149013_737 | 800790 | 802007 | - | GT4 |
| pfam | k141_149013 | k141_149013_738 | 802004 | 802495 | - | Hexapep |
| CAZyme | k141_149013 | k141_149013_739 | 802495 | 803337 | - | GT2 |
| TC | k141_149013 | k141_149013_740 | 803360 | 805522 | - | 8.A.3.3.2 |
| pfam | k141_149013 | k141_149013_741 | 805525 | 805968 | - | LMWPc |
| TC | k141_149013 | k141_149013_742 | 805975 | 807114 | - | 1.B.18.3.1 |
| TC | k141_149013 | k141_149013_743 | 807807 | 809390 | + | 2.A.109.2.3 |
| TC | k141_149013 | k141_149013_744 | 809437 | 811287 | - | 9.B.22.2.1 |
| pfam | k141_149013 | k141_149013_745 | 811310 | 811891 | - | DCD_N | DCD |
| pfam | k141_149013 | k141_149013_746 | 811983 | 812624 | - | PRK |
| TC | k141_149013 | k141_149013_747 | 812968 | 816297 | + | 9.B.34.1.1 |
Gene ID: k141_149013_735
Type: CAZyme
Location: 798832 - 799578 (-)
Type: CAZyme
Location: 798832 - 799578 (-)
Gene ID: k141_149013_736
Type:
Location: 799595 - 800815 (-)
Type:
Location: 799595 - 800815 (-)
Gene ID: k141_149013_737
Type: CAZyme
Location: 800790 - 802007 (-)
Type: CAZyme
Location: 800790 - 802007 (-)
Gene ID: k141_149013_738
Type: pfam
Location: 802004 - 802495 (-)
Type: pfam
Location: 802004 - 802495 (-)
Gene ID: k141_149013_739
Type: CAZyme
Location: 802495 - 803337 (-)
Type: CAZyme
Location: 802495 - 803337 (-)
Gene ID: k141_149013_740
Type: TC
Location: 803360 - 805522 (-)
Type: TC
Location: 803360 - 805522 (-)
Gene ID: k141_149013_741
Type: pfam
Location: 805525 - 805968 (-)
Type: pfam
Location: 805525 - 805968 (-)
Gene ID: k141_149013_742
Type: TC
Location: 805975 - 807114 (-)
Type: TC
Location: 805975 - 807114 (-)
Gene ID: k141_149013_743
Type: TC
Location: 807807 - 809390 (+)
Type: TC
Location: 807807 - 809390 (+)
Gene ID: k141_149013_744
Type: TC
Location: 809437 - 811287 (-)
Type: TC
Location: 809437 - 811287 (-)
Gene ID: k141_149013_745
Type: pfam
Location: 811310 - 811891 (-)
Type: pfam
Location: 811310 - 811891 (-)
Gene ID: k141_149013_746
Type: pfam
Location: 811983 - 812624 (-)
Type: pfam
Location: 811983 - 812624 (-)
Gene ID: k141_149013_747
Type: TC
Location: 812968 - 816297 (+)
Type: TC
Location: 812968 - 816297 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Enterobacter
Species
Enterobacter ludwigii
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_149013_735 | vegetarian > omnivore | 2.85420 | 0.03240 |
| k141_149013_738 | vegetarian > vegan | 1.24490 | 0.03740 |
| k141_149013_744 | vegetarian > omnivore | 1.12640 | 0.03240 |