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Cluster: CGMR067390_CGC38

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_149013 k141_149013_462 502425 503612 - 2.A.1.2.26
TF k141_149013 k141_149013_463 503728 504684 + HTH_AraC | HTH_AraC
CAZyme k141_149013 k141_149013_464 505047 506732 + GH37
TC k141_149013 k141_149013_465 506805 508907 - 1.B.14.1.2
TC k141_149013 k141_149013_466 509019 509273 - 1.E.43.1.1
pfam k141_149013 k141_149013_467 509481 510212 + PilZ | PilZN
CAZyme k141_149013 k141_149013_468 510250 510861 - GH23
peptidase k141_149013 k141_149013_469 510969 511883 + S66.002
TC k141_149013 k141_149013_470 511980 513713 + 2.A.36.6.11
Gene ID: k141_149013_462
Type: TC
Location: 502425 - 503612 (-)
Gene ID: k141_149013_463
Type: TF
Location: 503728 - 504684 (+)
Gene ID: k141_149013_464
Type: CAZyme
Location: 505047 - 506732 (+)
Gene ID: k141_149013_465
Type: TC
Location: 506805 - 508907 (-)
Gene ID: k141_149013_466
Type: TC
Location: 509019 - 509273 (-)
Gene ID: k141_149013_467
Type: pfam
Location: 509481 - 510212 (+)
Gene ID: k141_149013_468
Type: CAZyme
Location: 510250 - 510861 (-)
Gene ID: k141_149013_469
Type: peptidase
Location: 510969 - 511883 (+)
Gene ID: k141_149013_470
Type: TC
Location: 511980 - 513713 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_149013_467 vegetarian > omnivore 4.48519 0.03205
k141_149013_467 vegetarian > vegan 1.60201 0.03740
k141_149013_468 vegetarian > omnivore 1.13820 0.03240
k141_149013_468 vegetarian > vegan 1.48060 0.03740

🧭 Explore Read Mapping of CGC

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