Cluster: CGMR067390_CGC38
🧬 Cluster Details
- Gene Count: 9
- CAZyme Count: 2
- Substrate:
- Genome ID: CGMR067390
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_149013 | k141_149013_462 | 502425 | 503612 | - | 2.A.1.2.26 |
| TF | k141_149013 | k141_149013_463 | 503728 | 504684 | + | HTH_AraC | HTH_AraC |
| CAZyme | k141_149013 | k141_149013_464 | 505047 | 506732 | + | GH37 |
| TC | k141_149013 | k141_149013_465 | 506805 | 508907 | - | 1.B.14.1.2 |
| TC | k141_149013 | k141_149013_466 | 509019 | 509273 | - | 1.E.43.1.1 |
| pfam | k141_149013 | k141_149013_467 | 509481 | 510212 | + | PilZ | PilZN |
| CAZyme | k141_149013 | k141_149013_468 | 510250 | 510861 | - | GH23 |
| peptidase | k141_149013 | k141_149013_469 | 510969 | 511883 | + | S66.002 |
| TC | k141_149013 | k141_149013_470 | 511980 | 513713 | + | 2.A.36.6.11 |
Gene ID: k141_149013_462
Type: TC
Location: 502425 - 503612 (-)
Type: TC
Location: 502425 - 503612 (-)
Gene ID: k141_149013_463
Type: TF
Location: 503728 - 504684 (+)
Type: TF
Location: 503728 - 504684 (+)
Gene ID: k141_149013_464
Type: CAZyme
Location: 505047 - 506732 (+)
Type: CAZyme
Location: 505047 - 506732 (+)
Gene ID: k141_149013_465
Type: TC
Location: 506805 - 508907 (-)
Type: TC
Location: 506805 - 508907 (-)
Gene ID: k141_149013_466
Type: TC
Location: 509019 - 509273 (-)
Type: TC
Location: 509019 - 509273 (-)
Gene ID: k141_149013_467
Type: pfam
Location: 509481 - 510212 (+)
Type: pfam
Location: 509481 - 510212 (+)
Gene ID: k141_149013_468
Type: CAZyme
Location: 510250 - 510861 (-)
Type: CAZyme
Location: 510250 - 510861 (-)
Gene ID: k141_149013_469
Type: peptidase
Location: 510969 - 511883 (+)
Type: peptidase
Location: 510969 - 511883 (+)
Gene ID: k141_149013_470
Type: TC
Location: 511980 - 513713 (+)
Type: TC
Location: 511980 - 513713 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Enterobacter
Species
Enterobacter ludwigii
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_149013_467 | vegetarian > omnivore | 4.48519 | 0.03205 |
| k141_149013_467 | vegetarian > vegan | 1.60201 | 0.03740 |
| k141_149013_468 | vegetarian > omnivore | 1.13820 | 0.03240 |
| k141_149013_468 | vegetarian > vegan | 1.48060 | 0.03740 |