Cluster: CGMR067390_CGC37
🧬 Cluster Details
- Gene Count: 11
- CAZyme Count: 3
- Substrate:
- Genome ID: CGMR067390
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_149013 | k141_149013_243 | 268839 | 269753 | - | 1.B.21.1.1 |
| TC | k141_149013 | k141_149013_244 | 269820 | 270953 | - | 3.A.1.1.46 |
| pfam | k141_149013 | k141_149013_245 | 270905 | 271582 | - | Hydrolase | HAD_2 |
| CAZyme | k141_149013 | k141_149013_246 | 271572 | 273851 | - | GH65 |
| CAZyme | k141_149013 | k141_149013_247 | 273845 | 274900 | - | GH179 |
| pfam | k141_149013 | k141_149013_248 | 274915 | 275703 | - | AP_endonuc_2 |
| pfam | k141_149013 | k141_149013_249 | 275777 | 276772 | - | ADH_zinc_N |
| TC | k141_149013 | k141_149013_250 | 276801 | 277643 | - | 3.A.1.1.46 |
| TC | k141_149013 | k141_149013_251 | 277630 | 278511 | - | 3.A.1.1.46 |
| TC | k141_149013 | k141_149013_252 | 278534 | 279826 | - | 3.A.1.1.46 |
| CAZyme | k141_149013 | k141_149013_253 | 279842 | 281539 | - | GH13_18 |
Gene ID: k141_149013_243
Type: TC
Location: 268839 - 269753 (-)
Type: TC
Location: 268839 - 269753 (-)
Gene ID: k141_149013_244
Type: TC
Location: 269820 - 270953 (-)
Type: TC
Location: 269820 - 270953 (-)
Gene ID: k141_149013_245
Type: pfam
Location: 270905 - 271582 (-)
Type: pfam
Location: 270905 - 271582 (-)
Gene ID: k141_149013_246
Type: CAZyme
Location: 271572 - 273851 (-)
Type: CAZyme
Location: 271572 - 273851 (-)
Gene ID: k141_149013_247
Type: CAZyme
Location: 273845 - 274900 (-)
Type: CAZyme
Location: 273845 - 274900 (-)
Gene ID: k141_149013_248
Type: pfam
Location: 274915 - 275703 (-)
Type: pfam
Location: 274915 - 275703 (-)
Gene ID: k141_149013_249
Type: pfam
Location: 275777 - 276772 (-)
Type: pfam
Location: 275777 - 276772 (-)
Gene ID: k141_149013_250
Type: TC
Location: 276801 - 277643 (-)
Type: TC
Location: 276801 - 277643 (-)
Gene ID: k141_149013_251
Type: TC
Location: 277630 - 278511 (-)
Type: TC
Location: 277630 - 278511 (-)
Gene ID: k141_149013_252
Type: TC
Location: 278534 - 279826 (-)
Type: TC
Location: 278534 - 279826 (-)
Gene ID: k141_149013_253
Type: CAZyme
Location: 279842 - 281539 (-)
Type: CAZyme
Location: 279842 - 281539 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Enterobacter
Species
Enterobacter ludwigii
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_149013_243 | vegetarian > omnivore | 1.53463 | 0.03240 |
| k141_149013_244 | vegetarian > omnivore | 1.35621 | 0.03240 |
| k141_149013_244 | vegetarian > vegan | 1.30504 | 0.03740 |
| k141_149013_247 | vegetarian > vegan | 1.15348 | 0.03740 |