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Cluster: CGMR067390_CGC35

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_149013 k141_149013_94 99611 102745 - 2.A.6.1.3
TC k141_149013 k141_149013_95 102756 104006 - 2.A.6.1.4
TC k141_149013 k141_149013_96 104018 104359 - 2.A.6.1.4
TC k141_149013 k141_149013_97 104393 105778 - 1.B.17.3.4
TF k141_149013 k141_149013_98 105939 106652 + Trans_reg_C
TC k141_149013 k141_149013_99 106642 108102 + 2.A.21.9.1
TF k141_149013 k141_149013_100 108089 109012 - HTH_1
TC k141_149013 k141_149013_101 109129 110538 + 2.A.1.3.17
pfam k141_149013 k141_149013_102 110574 111569 - DUF2891
TC k141_149013 k141_149013_103 111596 112582 - 9.B.211.1.1
pfam k141_149013 k141_149013_104 112579 113301 - DUF969
TF k141_149013 k141_149013_105 113546 114094 + 0042156
CAZyme k141_149013 k141_149013_106 114095 116170 - CBM48 | GH13_11
CAZyme k141_149013 k141_149013_107 116187 118655 - GH13_26
CAZyme k141_149013 k141_149013_108 118652 120439 - GH13_10
Gene ID: k141_149013_94
Type: TC
Location: 99611 - 102745 (-)
Gene ID: k141_149013_95
Type: TC
Location: 102756 - 104006 (-)
Gene ID: k141_149013_96
Type: TC
Location: 104018 - 104359 (-)
Gene ID: k141_149013_97
Type: TC
Location: 104393 - 105778 (-)
Gene ID: k141_149013_98
Type: TF
Location: 105939 - 106652 (+)
Gene ID: k141_149013_99
Type: TC
Location: 106642 - 108102 (+)
Gene ID: k141_149013_100
Type: TF
Location: 108089 - 109012 (-)
Gene ID: k141_149013_101
Type: TC
Location: 109129 - 110538 (+)
Gene ID: k141_149013_102
Type: pfam
Location: 110574 - 111569 (-)
Gene ID: k141_149013_103
Type: TC
Location: 111596 - 112582 (-)
Gene ID: k141_149013_104
Type: pfam
Location: 112579 - 113301 (-)
Gene ID: k141_149013_105
Type: TF
Location: 113546 - 114094 (+)
Gene ID: k141_149013_106
Type: CAZyme
Location: 114095 - 116170 (-)
Gene ID: k141_149013_107
Type: CAZyme
Location: 116187 - 118655 (-)
Gene ID: k141_149013_108
Type: CAZyme
Location: 118652 - 120439 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_149013_98 vegetarian > vegan 2.35509 0.03740
k141_149013_102 vegetarian > omnivore 1.42518 0.03240
k141_149013_102 vegetarian > vegan 2.43110 0.02034
k141_149013_105 vegetarian > omnivore 1.06669 0.03240
k141_149013_105 vegetarian > vegan 1.88012 0.03740
k141_149013_106 vegetarian > omnivore 1.60339 0.03240
k141_149013_106 vegetarian > vegan 1.94091 0.03740
k141_149013_107 vegetarian > omnivore 1.22087 0.03240

🧭 Explore Read Mapping of CGC

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