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Cluster: CGMR067390_CGC27

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_59067 k141_59067_403 421726 422334 + 3.D.1.9.2
TC k141_59067 k141_59067_404 422331 424145 + 3.D.1.9.2
TC k141_59067 k141_59067_405 424147 425070 + 3.D.1.9.2
TC k141_59067 k141_59067_406 425086 426795 + 3.D.1.9.2
TC k141_59067 k141_59067_407 426890 427432 + 3.D.1.9.2
TC k141_59067 k141_59067_408 427432 428199 + 3.D.1.9.2
pfam k141_59067 k141_59067_409 428196 428606 + HycH
peptidase k141_59067 k141_59067_410 428599 429054 + A31.003
CAZyme k141_59067 k141_59067_411 429142 430566 - GH1
TC k141_59067 k141_59067_412 430585 432036 - 4.A.1.2.3
TF k141_59067 k141_59067_413 432251 433264 + LacI
TC k141_59067 k141_59067_414 433399 433944 + 5.A.3.11.1
pfam k141_59067 k141_59067_415 433951 436173 + Acylphosphatase | Sua5_yciO_yrdC | zf-HYPF | zf-HYPF | HypF_C | HypF_C_2
TC k141_59067 k141_59067_416 436175 437197 + 2.A.52.1.1
Gene ID: k141_59067_403
Type: TC
Location: 421726 - 422334 (+)
Gene ID: k141_59067_404
Type: TC
Location: 422331 - 424145 (+)
Gene ID: k141_59067_405
Type: TC
Location: 424147 - 425070 (+)
Gene ID: k141_59067_406
Type: TC
Location: 425086 - 426795 (+)
Gene ID: k141_59067_407
Type: TC
Location: 426890 - 427432 (+)
Gene ID: k141_59067_408
Type: TC
Location: 427432 - 428199 (+)
Gene ID: k141_59067_409
Type: pfam
Location: 428196 - 428606 (+)
Gene ID: k141_59067_410
Type: peptidase
Location: 428599 - 429054 (+)
Gene ID: k141_59067_411
Type: CAZyme
Location: 429142 - 430566 (-)
Gene ID: k141_59067_412
Type: TC
Location: 430585 - 432036 (-)
Gene ID: k141_59067_413
Type: TF
Location: 432251 - 433264 (+)
Gene ID: k141_59067_414
Type: TC
Location: 433399 - 433944 (+)
Gene ID: k141_59067_415
Type: pfam
Location: 433951 - 436173 (+)
Gene ID: k141_59067_416
Type: TC
Location: 436175 - 437197 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_59067_416 vegetarian > omnivore 1.14046 0.03240
k141_59067_416 vegetarian > vegan 1.08048 0.03740

🧭 Explore Read Mapping of CGC

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