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Cluster: CGMR067390_CGC23

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_59067 k141_59067_291 295252 295863 - 2.A.76.1.9
TF k141_59067 k141_59067_292 295938 296453 + HTH_11
TC k141_59067 k141_59067_293 296486 297715 - 2.A.42.2.5
TC k141_59067 k141_59067_294 297834 298295 - 2.A.117.1.3
TF k141_59067 k141_59067_295 298399 299265 + HTH_1
pfam k141_59067 k141_59067_296 299359 300537 + Thiolase_N | ketoacyl-synt | Thiolase_C
TC k141_59067 k141_59067_297 300855 301538 + 1.B.35.1.5
CAZyme k141_59067 k141_59067_298 301691 302866 - PL22 | PL22
pfam k141_59067 k141_59067_299 303165 304001 + KduI
pfam k141_59067 k141_59067_300 304065 304826 + adh_short | KR | adh_short_C2
TC k141_59067 k141_59067_301 305140 306555 + 2.A.1.1.2
TC k141_59067 k141_59067_302 306594 307880 - 3.A.1.1.11
TC k141_59067 k141_59067_303 307895 309022 - 3.A.1.1.11
TC k141_59067 k141_59067_304 309035 309937 - 3.A.1.1.11
TC k141_59067 k141_59067_305 309930 310820 - 3.A.1.1.11
Gene ID: k141_59067_291
Type: TC
Location: 295252 - 295863 (-)
Gene ID: k141_59067_292
Type: TF
Location: 295938 - 296453 (+)
Gene ID: k141_59067_293
Type: TC
Location: 296486 - 297715 (-)
Gene ID: k141_59067_294
Type: TC
Location: 297834 - 298295 (-)
Gene ID: k141_59067_295
Type: TF
Location: 298399 - 299265 (+)
Gene ID: k141_59067_296
Type: pfam
Location: 299359 - 300537 (+)
Gene ID: k141_59067_297
Type: TC
Location: 300855 - 301538 (+)
Gene ID: k141_59067_298
Type: CAZyme
Location: 301691 - 302866 (-)
Gene ID: k141_59067_299
Type: pfam
Location: 303165 - 304001 (+)
Gene ID: k141_59067_300
Type: pfam
Location: 304065 - 304826 (+)
Gene ID: k141_59067_301
Type: TC
Location: 305140 - 306555 (+)
Gene ID: k141_59067_302
Type: TC
Location: 306594 - 307880 (-)
Gene ID: k141_59067_303
Type: TC
Location: 307895 - 309022 (-)
Gene ID: k141_59067_304
Type: TC
Location: 309035 - 309937 (-)
Gene ID: k141_59067_305
Type: TC
Location: 309930 - 310820 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_59067_293 vegetarian > omnivore 1.45340 0.03240
k141_59067_294 vegetarian > vegan 1.30105 0.03740
k141_59067_298 vegetarian > omnivore 2.32038 0.03240
k141_59067_298 vegetarian > vegan 2.35024 0.03740
k141_59067_302 vegetarian > omnivore 1.60524 0.03240
k141_59067_303 vegetarian > omnivore 1.32724 0.03240
k141_59067_304 vegetarian > omnivore 1.05521 0.03240

🧭 Explore Read Mapping of CGC

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