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Cluster: CGMR067390_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_6170 k141_6170_3 916 2136 + 2.A.1.2.15
pfam k141_6170 k141_6170_4 2123 2536 + CMD
pfam k141_6170 k141_6170_5 2533 2736 + Thiolase_N
TC k141_6170 k141_6170_6 2897 3895 - 8.A.5.1.6
TC k141_6170 k141_6170_7 4103 5293 + 2.A.1.2.26
TC k141_6170 k141_6170_8 5333 6238 - 2.A.7.3.12
pfam k141_6170 k141_6170_9 6391 7770 - LamB
TC k141_6170 k141_6170_10 7909 8211 - 4.A.3.2.1
CAZyme k141_6170 k141_6170_11 8211 9593 - GH1
TC k141_6170 k141_6170_12 9611 10936 - 4.A.3.2.6
TC k141_6170 k141_6170_13 10948 11262 - 4.A.3.2.6
TF k141_6170 k141_6170_14 11556 12506 + LacI
NULL(UNKNOWN) k141_6170 k141_6170_15 12534 12830 - NULL(UNKNOWN)
[View Structural Homologs]
TC k141_6170 k141_6170_16 12968 14332 - 2.A.6.2.19
TC k141_6170 k141_6170_17 14332 17442 - 2.A.6.2.19
TC k141_6170 k141_6170_18 17442 18563 - 2.A.6.2.19
Gene ID: k141_6170_3
Type: TC
Location: 916 - 2136 (+)
Gene ID: k141_6170_4
Type: pfam
Location: 2123 - 2536 (+)
Gene ID: k141_6170_5
Type: pfam
Location: 2533 - 2736 (+)
Gene ID: k141_6170_6
Type: TC
Location: 2897 - 3895 (-)
Gene ID: k141_6170_7
Type: TC
Location: 4103 - 5293 (+)
Gene ID: k141_6170_8
Type: TC
Location: 5333 - 6238 (-)
Gene ID: k141_6170_9
Type: pfam
Location: 6391 - 7770 (-)
Gene ID: k141_6170_10
Type: TC
Location: 7909 - 8211 (-)
Gene ID: k141_6170_11
Type: CAZyme
Location: 8211 - 9593 (-)
Gene ID: k141_6170_12
Type: TC
Location: 9611 - 10936 (-)
Gene ID: k141_6170_13
Type: TC
Location: 10948 - 11262 (-)
Gene ID: k141_6170_14
Type: TF
Location: 11556 - 12506 (+)
Gene ID: k141_6170_15
Type:
Location: 12534 - 12830 (-)
Gene ID: k141_6170_16
Type: TC
Location: 12968 - 14332 (-)
Gene ID: k141_6170_17
Type: TC
Location: 14332 - 17442 (-)
Gene ID: k141_6170_18
Type: TC
Location: 17442 - 18563 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_6170_8 vegetarian > omnivore 1.27571 0.03240
k141_6170_9 vegetarian > omnivore 1.15206 0.03240
k141_6170_9 vegetarian > vegan 1.59510 0.03740
k141_6170_10 vegetarian > omnivore 1.81300 0.03240
k141_6170_11 vegetarian > vegan 1.19059 0.03740
k141_6170_12 vegetarian > omnivore 1.18741 0.03240
k141_6170_13 vegetarian > omnivore 1.63122 0.03240
k141_6170_14 vegetarian > omnivore 2.11620 0.03240
k141_6170_14 vegetarian > vegan 1.04014 0.03740
k141_6170_15 vegetarian > omnivore 1.00443 0.03240
k141_6170_16 vegetarian > vegan 1.46349 0.03740

🧭 Explore Read Mapping of CGC

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