Cluster: CGMR067258_CGC98
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 7
- Substrate:
- Genome ID: CGMR067258
- CGC Family ID: CGCFAM_06480
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_251836 | k141_251836_317 | 479838 | 482105 | + | GH74 | GH74 |
| TC | k141_251836 | k141_251836_318 | 482319 | 485543 | + | 1.B.14.6.1 |
| pfam | k141_251836 | k141_251836_319 | 485570 | 487270 | + | SusD_RagB | SusD-like_3 |
| CAZyme | k141_251836 | k141_251836_320 | 487509 | 490037 | + | GH9 |
| CAZyme | k141_251836 | k141_251836_321 | 490079 | 492601 | + | GH9 |
| NULL(UNKNOWN) | k141_251836 | k141_251836_322 | 492625 | 492783 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | k141_251836 | k141_251836_323 | 492759 | 494468 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | k141_251836 | k141_251836_324 | 494482 | 496869 | + | GH31_3 |
| CAZyme | k141_251836 | k141_251836_325 | 496881 | 499700 | + | GH31_4 |
| CAZyme | k141_251836 | k141_251836_326 | 499714 | 502215 | + | GH2 |
| CAZyme | k141_251836 | k141_251836_327 | 502226 | 504424 | + | GH3 |
| TC | k141_251836 | k141_251836_328 | 504505 | 506022 | - | 2.A.36.6.11 |
Gene ID: k141_251836_317
Type: CAZyme
Location: 479838 - 482105 (+)
Type: CAZyme
Location: 479838 - 482105 (+)
Gene ID: k141_251836_318
Type: TC
Location: 482319 - 485543 (+)
Type: TC
Location: 482319 - 485543 (+)
Gene ID: k141_251836_319
Type: pfam
Location: 485570 - 487270 (+)
Type: pfam
Location: 485570 - 487270 (+)
Gene ID: k141_251836_320
Type: CAZyme
Location: 487509 - 490037 (+)
Type: CAZyme
Location: 487509 - 490037 (+)
Gene ID: k141_251836_321
Type: CAZyme
Location: 490079 - 492601 (+)
Type: CAZyme
Location: 490079 - 492601 (+)
Gene ID: k141_251836_322
Type:
Location: 492625 - 492783 (+)
Type:
Location: 492625 - 492783 (+)
Gene ID: k141_251836_323
Type:
Location: 492759 - 494468 (+)
Type:
Location: 492759 - 494468 (+)
Gene ID: k141_251836_324
Type: CAZyme
Location: 494482 - 496869 (+)
Type: CAZyme
Location: 494482 - 496869 (+)
Gene ID: k141_251836_325
Type: CAZyme
Location: 496881 - 499700 (+)
Type: CAZyme
Location: 496881 - 499700 (+)
Gene ID: k141_251836_326
Type: CAZyme
Location: 499714 - 502215 (+)
Type: CAZyme
Location: 499714 - 502215 (+)
Gene ID: k141_251836_327
Type: CAZyme
Location: 502226 - 504424 (+)
Type: CAZyme
Location: 502226 - 504424 (+)
Gene ID: k141_251836_328
Type: TC
Location: 504505 - 506022 (-)
Type: TC
Location: 504505 - 506022 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Tannerellaceae
Genus
Parabacteroides
Species
Parabacteroides faecis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.