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Cluster: CGMR067258_CGC92

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_251836 k141_251836_171 252766 256200 + 1.B.14.6.1
pfam k141_251836 k141_251836_172 256220 257929 + SusD_RagB | SusD-like_3
CAZyme k141_251836 k141_251836_173 257941 260139 + GH31_14
CAZyme k141_251836 k141_251836_174 260338 262314 + GH97
CAZyme k141_251836 k141_251836_175 262386 263681 + GH117
CAZyme k141_251836 k141_251836_176 263744 266590 + CBM51
pfam k141_251836 k141_251836_177 266908 269892 + GH123_N
pfam k141_251836 k141_251836_178 269952 273119 + TPR_4 | TPR_8 | TPR_16 | DUF5107
CAZyme k141_251836 k141_251836_179 273294 276935 + CBM67 | GH78
TC k141_251836 k141_251836_180 277386 280508 + 1.B.14.6.1
TC k141_251836 k141_251836_181 280522 282066 + 8.A.46.1.3
CAZyme k141_251836 k141_251836_182 282142 285042 + GH106
CAZyme k141_251836 k141_251836_183 285141 287693 + CBM67 | GH78
CAZyme k141_251836 k141_251836_184 287745 290417 + CBM67 | GH78
CAZyme k141_251836 k141_251836_185 290426 293083 + CBM67 | GH78
CAZyme k141_251836 k141_251836_186 293195 296311 + GH106
pfam k141_251836 k141_251836_187 296525 297409 + AP_endonuc_2
CAZyme k141_251836 k141_251836_188 297414 298556 + GH43_24
TC k141_251836 k141_251836_189 298693 299583 + 2.A.115.1.1
STP k141_251836 k141_251836_190 300213 300761 + Sigma70_r2 | Sigma70_r4_2
STP k141_251836 k141_251836_191 300828 301910 + FecR
TC k141_251836 k141_251836_192 302034 305558 + 1.B.14.6.1
Gene ID: k141_251836_171
Type: TC
Location: 252766 - 256200 (+)
Gene ID: k141_251836_172
Type: pfam
Location: 256220 - 257929 (+)
Gene ID: k141_251836_173
Type: CAZyme
Location: 257941 - 260139 (+)
Gene ID: k141_251836_174
Type: CAZyme
Location: 260338 - 262314 (+)
Gene ID: k141_251836_175
Type: CAZyme
Location: 262386 - 263681 (+)
Gene ID: k141_251836_176
Type: CAZyme
Location: 263744 - 266590 (+)
Gene ID: k141_251836_177
Type: pfam
Location: 266908 - 269892 (+)
Gene ID: k141_251836_178
Type: pfam
Location: 269952 - 273119 (+)
Gene ID: k141_251836_179
Type: CAZyme
Location: 273294 - 276935 (+)
Gene ID: k141_251836_180
Type: TC
Location: 277386 - 280508 (+)
Gene ID: k141_251836_181
Type: TC
Location: 280522 - 282066 (+)
Gene ID: k141_251836_182
Type: CAZyme
Location: 282142 - 285042 (+)
Gene ID: k141_251836_183
Type: CAZyme
Location: 285141 - 287693 (+)
Gene ID: k141_251836_184
Type: CAZyme
Location: 287745 - 290417 (+)
Gene ID: k141_251836_185
Type: CAZyme
Location: 290426 - 293083 (+)
Gene ID: k141_251836_186
Type: CAZyme
Location: 293195 - 296311 (+)
Gene ID: k141_251836_187
Type: pfam
Location: 296525 - 297409 (+)
Gene ID: k141_251836_188
Type: CAZyme
Location: 297414 - 298556 (+)
Gene ID: k141_251836_189
Type: TC
Location: 298693 - 299583 (+)
Gene ID: k141_251836_190
Type: STP
Location: 300213 - 300761 (+)
Gene ID: k141_251836_191
Type: STP
Location: 300828 - 301910 (+)
Gene ID: k141_251836_192
Type: TC
Location: 302034 - 305558 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_251836_178 vegan > omnivore 2.04511 0.04503
k141_251836_178 vegetarian > omnivore 1.83994 0.01970

🧭 Explore Read Mapping of CGC

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