Cluster: CGMR067258_CGC87
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR067258
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_251836 | k141_251836_48 | 63232 | 66516 | + | 1.B.14.6.2 |
| TC | k141_251836 | k141_251836_49 | 66554 | 68164 | + | 8.A.46.2.2 |
| CAZyme | k141_251836 | k141_251836_50 | 68297 | 70696 | + | GH3 |
Gene ID: k141_251836_48
Type: TC
Location: 63232 - 66516 (+)
Type: TC
Location: 63232 - 66516 (+)
Gene ID: k141_251836_49
Type: TC
Location: 66554 - 68164 (+)
Type: TC
Location: 66554 - 68164 (+)
Gene ID: k141_251836_50
Type: CAZyme
Location: 68297 - 70696 (+)
Type: CAZyme
Location: 68297 - 70696 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Tannerellaceae
Genus
Parabacteroides
Species
Parabacteroides faecis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_251836_50 | vegetarian > omnivore | 1.28757 | 0.01970 |
| k141_251836_50 | vegetarian > vegan | 1.90475 | 0.03621 |