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Cluster: CGMR067258_CGC68

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_215136 k141_215136_65 71906 75286 - GH2
pfam k141_215136 k141_215136_66 75385 75939 - DUF3332
pfam k141_215136 k141_215136_67 76058 77839 - SusD_RagB | SusD-like_3
TC k141_215136 k141_215136_68 77862 80984 - 1.B.14.6.1
pfam k141_215136 k141_215136_69 81317 82795 - PD40 | PD40 | PD40
pfam k141_215136 k141_215136_70 82799 84355 - DUF6057
TC k141_215136 k141_215136_71 84409 86040 - 8.A.46.1.6
TC k141_215136 k141_215136_72 86061 89120 - 1.B.14.6.1
TC k141_215136 k141_215136_73 89673 91619 + 3.A.1.121.4
CAZyme k141_215136 k141_215136_74 91774 92940 + CE9
CAZyme k141_215136 k141_215136_75 92974 94140 + CE9
Gene ID: k141_215136_65
Type: CAZyme
Location: 71906 - 75286 (-)
Gene ID: k141_215136_66
Type: pfam
Location: 75385 - 75939 (-)
Gene ID: k141_215136_67
Type: pfam
Location: 76058 - 77839 (-)
Gene ID: k141_215136_68
Type: TC
Location: 77862 - 80984 (-)
Gene ID: k141_215136_69
Type: pfam
Location: 81317 - 82795 (-)
Gene ID: k141_215136_70
Type: pfam
Location: 82799 - 84355 (-)
Gene ID: k141_215136_71
Type: TC
Location: 84409 - 86040 (-)
Gene ID: k141_215136_72
Type: TC
Location: 86061 - 89120 (-)
Gene ID: k141_215136_73
Type: TC
Location: 89673 - 91619 (+)
Gene ID: k141_215136_74
Type: CAZyme
Location: 91774 - 92940 (+)
Gene ID: k141_215136_75
Type: CAZyme
Location: 92974 - 94140 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_215136_66 vegetarian > omnivore 1.03391 0.01970

🧭 Explore Read Mapping of CGC

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