Cluster: CGMR067258_CGC64
🧬 Cluster Details
- Gene Count: 16
- CAZyme Count: 4
- Substrate:
- Genome ID: CGMR067258
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_19846 | k141_19846_39 | 50652 | 53114 | - | 3.A.11.3.1 |
| pfam | k141_19846 | k141_19846_40 | 53184 | 53777 | - | OMP_b-brl | OMP_b-brl_2 |
| CAZyme | k141_19846 | k141_19846_41 | 54358 | 55836 | - | GH136 |
| pfam | k141_19846 | k141_19846_42 | 55941 | 57581 | - | SusD_RagB | SusD-like_3 |
| TC | k141_19846 | k141_19846_43 | 57594 | 60581 | - | 1.B.14.6.2 |
| pfam | k141_19846 | k141_19846_44 | 60610 | 62370 | - | SusD_RagB | SusD-like_3 |
| TC | k141_19846 | k141_19846_45 | 62383 | 65559 | - | 1.B.14.6.1 |
| TF | k141_19846 | k141_19846_46 | 66043 | 70167 | + | HTH_AraC |
| STP | k141_19846 | k141_19846_47 | 70196 | 71008 | - | SIS |
| CAZyme | k141_19846 | k141_19846_48 | 71128 | 72408 | - | CE7 |
| NULL(UNKNOWN) | k141_19846 | k141_19846_49 | 72483 | 73313 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | k141_19846 | k141_19846_50 | 73332 | 74615 | - | 2.A.1.25.5 |
| pfam | k141_19846 | k141_19846_51 | 74612 | 75556 | - | DUF4922 | Ap4A_phos_N |
| CAZyme | k141_19846 | k141_19846_52 | 75580 | 77037 | - | GT2 |
| pfam | k141_19846 | k141_19846_53 | 77099 | 78097 | - | CN_hydrolase |
| CAZyme | k141_19846 | k141_19846_54 | 78107 | 80161 | - | PL21_1 |
Gene ID: k141_19846_39
Type: TC
Location: 50652 - 53114 (-)
Type: TC
Location: 50652 - 53114 (-)
Gene ID: k141_19846_40
Type: pfam
Location: 53184 - 53777 (-)
Type: pfam
Location: 53184 - 53777 (-)
Gene ID: k141_19846_41
Type: CAZyme
Location: 54358 - 55836 (-)
Type: CAZyme
Location: 54358 - 55836 (-)
Gene ID: k141_19846_42
Type: pfam
Location: 55941 - 57581 (-)
Type: pfam
Location: 55941 - 57581 (-)
Gene ID: k141_19846_43
Type: TC
Location: 57594 - 60581 (-)
Type: TC
Location: 57594 - 60581 (-)
Gene ID: k141_19846_44
Type: pfam
Location: 60610 - 62370 (-)
Type: pfam
Location: 60610 - 62370 (-)
Gene ID: k141_19846_45
Type: TC
Location: 62383 - 65559 (-)
Type: TC
Location: 62383 - 65559 (-)
Gene ID: k141_19846_46
Type: TF
Location: 66043 - 70167 (+)
Type: TF
Location: 66043 - 70167 (+)
Gene ID: k141_19846_47
Type: STP
Location: 70196 - 71008 (-)
Type: STP
Location: 70196 - 71008 (-)
Gene ID: k141_19846_48
Type: CAZyme
Location: 71128 - 72408 (-)
Type: CAZyme
Location: 71128 - 72408 (-)
Gene ID: k141_19846_49
Type:
Location: 72483 - 73313 (-)
Type:
Location: 72483 - 73313 (-)
Gene ID: k141_19846_50
Type: TC
Location: 73332 - 74615 (-)
Type: TC
Location: 73332 - 74615 (-)
Gene ID: k141_19846_51
Type: pfam
Location: 74612 - 75556 (-)
Type: pfam
Location: 74612 - 75556 (-)
Gene ID: k141_19846_52
Type: CAZyme
Location: 75580 - 77037 (-)
Type: CAZyme
Location: 75580 - 77037 (-)
Gene ID: k141_19846_53
Type: pfam
Location: 77099 - 78097 (-)
Type: pfam
Location: 77099 - 78097 (-)
Gene ID: k141_19846_54
Type: CAZyme
Location: 78107 - 80161 (-)
Type: CAZyme
Location: 78107 - 80161 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Tannerellaceae
Genus
Parabacteroides
Species
Parabacteroides faecis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.