Cluster: CGMR067258_CGC59
🧬 Cluster Details
- Gene Count: 16
- CAZyme Count: 6
- Substrate:
- Genome ID: CGMR067258
- CGC Family ID: CGCFAM_01744
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_240268 | k141_240268_3 | 3400 | 5421 | - | GH33 |
| pfam | k141_240268 | k141_240268_4 | 5565 | 7001 | - | Aldedh |
| CAZyme | k141_240268 | k141_240268_5 | 7187 | 8506 | - | CE7 |
| CAZyme | k141_240268 | k141_240268_6 | 8637 | 12113 | - | GH173 | GH36 |
| CAZyme | k141_240268 | k141_240268_7 | 12110 | 14236 | - | GH36 |
| pfam | k141_240268 | k141_240268_8 | 14468 | 16333 | - | SusD_RagB | SusD-like_2 | SusD-like_3 |
| TC | k141_240268 | k141_240268_9 | 16345 | 19473 | - | 1.B.14.6.1 |
| TC | k141_240268 | k141_240268_10 | 19682 | 20839 | - | 2.A.1.7.17 |
| STP | k141_240268 | k141_240268_11 | 20862 | 21440 | - | SIS |
| STP | k141_240268 | k141_240268_12 | 21455 | 22423 | - | Glucokinase |
| CAZyme | k141_240268 | k141_240268_13 | 22420 | 24822 | - | GH2 |
| CAZyme | k141_240268 | k141_240268_14 | 24844 | 27480 | - | CBM67 | GH78 |
| TF | k141_240268 | k141_240268_15 | 27541 | 28554 | - | LacI |
| pfam | k141_240268 | k141_240268_16 | 28771 | 29952 | - | OEP | OEP |
| TC | k141_240268 | k141_240268_17 | 29949 | 33059 | - | 2.A.6.1.5 |
| TC | k141_240268 | k141_240268_18 | 33075 | 34313 | - | 2.A.6.1.7 |
Gene ID: k141_240268_3
Type: CAZyme
Location: 3400 - 5421 (-)
Type: CAZyme
Location: 3400 - 5421 (-)
Gene ID: k141_240268_4
Type: pfam
Location: 5565 - 7001 (-)
Type: pfam
Location: 5565 - 7001 (-)
Gene ID: k141_240268_5
Type: CAZyme
Location: 7187 - 8506 (-)
Type: CAZyme
Location: 7187 - 8506 (-)
Gene ID: k141_240268_6
Type: CAZyme
Location: 8637 - 12113 (-)
Type: CAZyme
Location: 8637 - 12113 (-)
Gene ID: k141_240268_7
Type: CAZyme
Location: 12110 - 14236 (-)
Type: CAZyme
Location: 12110 - 14236 (-)
Gene ID: k141_240268_8
Type: pfam
Location: 14468 - 16333 (-)
Type: pfam
Location: 14468 - 16333 (-)
Gene ID: k141_240268_9
Type: TC
Location: 16345 - 19473 (-)
Type: TC
Location: 16345 - 19473 (-)
Gene ID: k141_240268_10
Type: TC
Location: 19682 - 20839 (-)
Type: TC
Location: 19682 - 20839 (-)
Gene ID: k141_240268_11
Type: STP
Location: 20862 - 21440 (-)
Type: STP
Location: 20862 - 21440 (-)
Gene ID: k141_240268_12
Type: STP
Location: 21455 - 22423 (-)
Type: STP
Location: 21455 - 22423 (-)
Gene ID: k141_240268_13
Type: CAZyme
Location: 22420 - 24822 (-)
Type: CAZyme
Location: 22420 - 24822 (-)
Gene ID: k141_240268_14
Type: CAZyme
Location: 24844 - 27480 (-)
Type: CAZyme
Location: 24844 - 27480 (-)
Gene ID: k141_240268_15
Type: TF
Location: 27541 - 28554 (-)
Type: TF
Location: 27541 - 28554 (-)
Gene ID: k141_240268_16
Type: pfam
Location: 28771 - 29952 (-)
Type: pfam
Location: 28771 - 29952 (-)
Gene ID: k141_240268_17
Type: TC
Location: 29949 - 33059 (-)
Type: TC
Location: 29949 - 33059 (-)
Gene ID: k141_240268_18
Type: TC
Location: 33075 - 34313 (-)
Type: TC
Location: 33075 - 34313 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Tannerellaceae
Genus
Parabacteroides
Species
Parabacteroides faecis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.