Cluster: CGMR067258_CGC49
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR067258
- CGC Family ID: CGCFAM_03776
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_181603 | k141_181603_1 | 231 | 1430 | + | 2.A.1.46.5 |
| CAZyme | k141_181603 | k141_181603_2 | 1422 | 2663 | - | GT1 |
| NULL(UNKNOWN) | k141_181603 | k141_181603_3 | 2664 | 2837 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | k141_181603 | k141_181603_4 | 3039 | 4217 | + | DUF4925 |
| TC | k141_181603 | k141_181603_5 | 4236 | 7049 | + | 1.B.14.10.1 |
| pfam | k141_181603 | k141_181603_6 | 7124 | 7687 | - | Formyl_trans_N |
| TC | k141_181603 | k141_181603_7 | 7842 | 8078 | + | 3.D.1.6.3 |
Gene ID: k141_181603_1
Type: TC
Location: 231 - 1430 (+)
Type: TC
Location: 231 - 1430 (+)
Gene ID: k141_181603_2
Type: CAZyme
Location: 1422 - 2663 (-)
Type: CAZyme
Location: 1422 - 2663 (-)
Gene ID: k141_181603_3
Type:
Location: 2664 - 2837 (-)
Type:
Location: 2664 - 2837 (-)
Gene ID: k141_181603_4
Type: pfam
Location: 3039 - 4217 (+)
Type: pfam
Location: 3039 - 4217 (+)
Gene ID: k141_181603_5
Type: TC
Location: 4236 - 7049 (+)
Type: TC
Location: 4236 - 7049 (+)
Gene ID: k141_181603_6
Type: pfam
Location: 7124 - 7687 (-)
Type: pfam
Location: 7124 - 7687 (-)
Gene ID: k141_181603_7
Type: TC
Location: 7842 - 8078 (+)
Type: TC
Location: 7842 - 8078 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Tannerellaceae
Genus
Parabacteroides
Species
Parabacteroides faecis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_181603_3 | vegetarian > omnivore | 4.76537 | 0.01970 |
| k141_181603_3 | vegetarian > vegan | 1.12338 | 0.03621 |