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Cluster: CGMR067258_CGC47

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_139225 k141_139225_9 8529 11924 + 1.B.14.6.1
pfam k141_139225 k141_139225_10 11944 13731 + SusD_RagB | SusD-like_3
pfam k141_139225 k141_139225_11 14012 16990 + Laminin_G_3
CAZyme k141_139225 k141_139225_12 17026 19284 + GH92
CAZyme k141_139225 k141_139225_13 19314 22055 + GH38
NULL(UNKNOWN) k141_139225 k141_139225_14 22067 24334 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme k141_139225 k141_139225_15 24434 26338 + GH120
NULL(UNKNOWN) k141_139225 k141_139225_16 26319 26417 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme k141_139225 k141_139225_17 26431 28671 + GH182
NULL(UNKNOWN) k141_139225 k141_139225_18 28684 30963 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme k141_139225 k141_139225_19 31280 33016 + CBM32 | GH43_28
CAZyme k141_139225 k141_139225_20 33047 35491 + GH2
CAZyme k141_139225 k141_139225_21 35505 37721 + GH3
CAZyme k141_139225 k141_139225_22 37708 39543 + GH110
CAZyme k141_139225 k141_139225_23 39564 41822 + GH95
STP k141_139225 k141_139225_24 41991 42539 + Sigma70_r2 | Sigma70_r4_2
STP k141_139225 k141_139225_25 42633 43691 + FecR
TC k141_139225 k141_139225_26 43869 47174 + 1.B.14.6.1
TC k141_139225 k141_139225_27 47232 48980 + 8.A.46.1.6
CAZyme k141_139225 k141_139225_28 49107 52706 + GH106
TF k141_139225 k141_139225_29 52981 53592 + GerE
STP k141_139225 k141_139225_30 53601 54554 + FecR
TC k141_139225 k141_139225_31 54710 58012 + 1.B.14.6.1
TC k141_139225 k141_139225_32 58024 59733 + 8.A.46.1.6
CAZyme k141_139225 k141_139225_33 59872 61746 + GH97
sulfatase k141_139225 k141_139225_34 61898 64003 + S1_50
CAZyme k141_139225 k141_139225_35 64114 66102 + GH38
TF k141_139225 k141_139225_36 66218 66781 + GerE
STP k141_139225 k141_139225_37 67060 68019 + FecR
TC k141_139225 k141_139225_38 68230 71610 + 1.B.14.6.1
pfam k141_139225 k141_139225_39 71597 73441 + SusD_RagB | SusD-like_3
CAZyme k141_139225 k141_139225_40 73641 75563 + GH97
CAZyme k141_139225 k141_139225_41 75570 77816 + GH182
TF k141_139225 k141_139225_42 77928 78866 - HTH_AraC | HTH_AraC
CAZyme k141_139225 k141_139225_43 78882 81308 + GH3
CAZyme k141_139225 k141_139225_44 81411 84305 + GH38
CAZyme k141_139225 k141_139225_45 84448 86976 + GH89
CAZyme k141_139225 k141_139225_46 87101 88990 + GH120
Gene ID: k141_139225_9
Type: TC
Location: 8529 - 11924 (+)
Gene ID: k141_139225_10
Type: pfam
Location: 11944 - 13731 (+)
Gene ID: k141_139225_11
Type: pfam
Location: 14012 - 16990 (+)
Gene ID: k141_139225_12
Type: CAZyme
Location: 17026 - 19284 (+)
Gene ID: k141_139225_13
Type: CAZyme
Location: 19314 - 22055 (+)
Gene ID: k141_139225_14
Type:
Location: 22067 - 24334 (+)
Gene ID: k141_139225_15
Type: CAZyme
Location: 24434 - 26338 (+)
Gene ID: k141_139225_16
Type:
Location: 26319 - 26417 (+)
Gene ID: k141_139225_17
Type: CAZyme
Location: 26431 - 28671 (+)
Gene ID: k141_139225_18
Type:
Location: 28684 - 30963 (+)
Gene ID: k141_139225_19
Type: CAZyme
Location: 31280 - 33016 (+)
Gene ID: k141_139225_20
Type: CAZyme
Location: 33047 - 35491 (+)
Gene ID: k141_139225_21
Type: CAZyme
Location: 35505 - 37721 (+)
Gene ID: k141_139225_22
Type: CAZyme
Location: 37708 - 39543 (+)
Gene ID: k141_139225_23
Type: CAZyme
Location: 39564 - 41822 (+)
Gene ID: k141_139225_24
Type: STP
Location: 41991 - 42539 (+)
Gene ID: k141_139225_25
Type: STP
Location: 42633 - 43691 (+)
Gene ID: k141_139225_26
Type: TC
Location: 43869 - 47174 (+)
Gene ID: k141_139225_27
Type: TC
Location: 47232 - 48980 (+)
Gene ID: k141_139225_28
Type: CAZyme
Location: 49107 - 52706 (+)
Gene ID: k141_139225_29
Type: TF
Location: 52981 - 53592 (+)
Gene ID: k141_139225_30
Type: STP
Location: 53601 - 54554 (+)
Gene ID: k141_139225_31
Type: TC
Location: 54710 - 58012 (+)
Gene ID: k141_139225_32
Type: TC
Location: 58024 - 59733 (+)
Gene ID: k141_139225_33
Type: CAZyme
Location: 59872 - 61746 (+)
Gene ID: k141_139225_34
Type: sulfatase
Location: 61898 - 64003 (+)
Gene ID: k141_139225_35
Type: CAZyme
Location: 64114 - 66102 (+)
Gene ID: k141_139225_36
Type: TF
Location: 66218 - 66781 (+)
Gene ID: k141_139225_37
Type: STP
Location: 67060 - 68019 (+)
Gene ID: k141_139225_38
Type: TC
Location: 68230 - 71610 (+)
Gene ID: k141_139225_39
Type: pfam
Location: 71597 - 73441 (+)
Gene ID: k141_139225_40
Type: CAZyme
Location: 73641 - 75563 (+)
Gene ID: k141_139225_41
Type: CAZyme
Location: 75570 - 77816 (+)
Gene ID: k141_139225_42
Type: TF
Location: 77928 - 78866 (-)
Gene ID: k141_139225_43
Type: CAZyme
Location: 78882 - 81308 (+)
Gene ID: k141_139225_44
Type: CAZyme
Location: 81411 - 84305 (+)
Gene ID: k141_139225_45
Type: CAZyme
Location: 84448 - 86976 (+)
Gene ID: k141_139225_46
Type: CAZyme
Location: 87101 - 88990 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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