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Cluster: CGMR067258_CGC43

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_233115 k141_233115_16 26117 28636 - CE17
sulfatase k141_233115 k141_233115_17 28762 29778 - S1_16
TC k141_233115 k141_233115_18 29802 31052 - 2.A.1.7.1
pfam k141_233115 k141_233115_19 31075 31998 - Amidohydro_2
TC k141_233115 k141_233115_20 31995 32897 - 8.A.5.1.6
TF k141_233115 k141_233115_21 33269 34318 + LacI
TF k141_233115 k141_233115_22 34304 38350 - HTH_AraC
TC k141_233115 k141_233115_23 38532 39974 + 2.A.1.14.25
Gene ID: k141_233115_16
Type: CAZyme
Location: 26117 - 28636 (-)
Gene ID: k141_233115_17
Type: sulfatase
Location: 28762 - 29778 (-)
Gene ID: k141_233115_18
Type: TC
Location: 29802 - 31052 (-)
Gene ID: k141_233115_19
Type: pfam
Location: 31075 - 31998 (-)
Gene ID: k141_233115_20
Type: TC
Location: 31995 - 32897 (-)
Gene ID: k141_233115_21
Type: TF
Location: 33269 - 34318 (+)
Gene ID: k141_233115_22
Type: TF
Location: 34304 - 38350 (-)
Gene ID: k141_233115_23
Type: TC
Location: 38532 - 39974 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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