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Cluster: CGMR067258_CGC34

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_189897 k141_189897_14 15111 16655 - 3.B.1.1.2
TF k141_189897 k141_189897_15 17072 17785 + GntR
TC k141_189897 k141_189897_16 17804 20392 + 2.A.21.3.7
pfam k141_189897 k141_189897_17 20397 21308 + DHDPS
TC k141_189897 k141_189897_18 21393 24557 + 1.B.14.6.1
pfam k141_189897 k141_189897_19 24595 25515 + SusD-like_3
pfam k141_189897 k141_189897_20 25735 26049 + SusD_RagB
CAZyme k141_189897 k141_189897_21 26106 27254 + GH33
sulfatase k141_189897 k141_189897_22 27262 28698 + S1_7
CAZyme k141_189897 k141_189897_23 28706 30337 + GH33
Gene ID: k141_189897_14
Type: TC
Location: 15111 - 16655 (-)
Gene ID: k141_189897_15
Type: TF
Location: 17072 - 17785 (+)
Gene ID: k141_189897_16
Type: TC
Location: 17804 - 20392 (+)
Gene ID: k141_189897_17
Type: pfam
Location: 20397 - 21308 (+)
Gene ID: k141_189897_18
Type: TC
Location: 21393 - 24557 (+)
Gene ID: k141_189897_19
Type: pfam
Location: 24595 - 25515 (+)
Gene ID: k141_189897_20
Type: pfam
Location: 25735 - 26049 (+)
Gene ID: k141_189897_21
Type: CAZyme
Location: 26106 - 27254 (+)
Gene ID: k141_189897_22
Type: sulfatase
Location: 27262 - 28698 (+)
Gene ID: k141_189897_23
Type: CAZyme
Location: 28706 - 30337 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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