Cluster: CGMR067258_CGC25
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate: pectin/galactan/beta-glucan/xylan/beta-mannan/host glycan
- Genome ID: CGMR067258
- CGC Family ID: CGCFAM_00001
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_11242 | k141_11242_12 | 13509 | 16790 | + | 1.B.14.6.1 |
| pfam | k141_11242 | k141_11242_13 | 16802 | 18760 | + | SusD_RagB | SusD-like_3 |
| pfam | k141_11242 | k141_11242_14 | 18907 | 19350 | + | HU-HIG |
| CAZyme | k141_11242 | k141_11242_15 | 19709 | 22813 | - | GH2 |
| CAZyme | k141_11242 | k141_11242_16 | 22819 | 25158 | - | GH20 |
Gene ID: k141_11242_12
Type: TC
Location: 13509 - 16790 (+)
Type: TC
Location: 13509 - 16790 (+)
Gene ID: k141_11242_13
Type: pfam
Location: 16802 - 18760 (+)
Type: pfam
Location: 16802 - 18760 (+)
Gene ID: k141_11242_14
Type: pfam
Location: 18907 - 19350 (+)
Type: pfam
Location: 18907 - 19350 (+)
Gene ID: k141_11242_15
Type: CAZyme
Location: 19709 - 22813 (-)
Type: CAZyme
Location: 19709 - 22813 (-)
Gene ID: k141_11242_16
Type: CAZyme
Location: 22819 - 25158 (-)
Type: CAZyme
Location: 22819 - 25158 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Tannerellaceae
Genus
Parabacteroides
Species
Parabacteroides faecis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.