Cluster: CGMR067258_CGC20
🧬 Cluster Details
- Gene Count: 16
- CAZyme Count: 10
- Substrate:
- Genome ID: CGMR067258
- CGC Family ID: CGCFAM_05370
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_146131 | k141_146131_10 | 13937 | 17536 | + | 1.B.14.6.1 |
| pfam | k141_146131 | k141_146131_11 | 17570 | 19042 | + | SusD_RagB | SusD-like_3 |
| CAZyme | k141_146131 | k141_146131_12 | 19136 | 20308 | + | GH16_24 |
| CAZyme | k141_146131 | k141_146131_13 | 20319 | 22472 | + | GH89 |
| CAZyme | k141_146131 | k141_146131_14 | 22493 | 24094 | + | GH31_19 |
| CAZyme | k141_146131 | k141_146131_15 | 24150 | 26699 | - | GH2 |
| CAZyme | k141_146131 | k141_146131_16 | 26715 | 29009 | - | GH92 |
| CAZyme | k141_146131 | k141_146131_17 | 29049 | 30989 | - | CE20 | CE20 |
| CAZyme | k141_146131 | k141_146131_18 | 31014 | 33329 | - | GH92 |
| CAZyme | k141_146131 | k141_146131_19 | 33347 | 35845 | - | GH38 |
| pfam | k141_146131 | k141_146131_20 | 35874 | 37259 | - | Lipase_GDSL | Lipase_GDSL_2 |
| CAZyme | k141_146131 | k141_146131_21 | 37265 | 38416 | - | GH130_3 |
| CAZyme | k141_146131 | k141_146131_22 | 38579 | 40738 | - | GH92 |
| pfam | k141_146131 | k141_146131_23 | 40866 | 41639 | - | DUF3823 | DUF3823_C |
| pfam | k141_146131 | k141_146131_24 | 41658 | 43469 | - | SusD_RagB | SusD-like_3 |
| TC | k141_146131 | k141_146131_25 | 43481 | 46882 | - | 1.B.14.6.1 |
Gene ID: k141_146131_10
Type: TC
Location: 13937 - 17536 (+)
Type: TC
Location: 13937 - 17536 (+)
Gene ID: k141_146131_11
Type: pfam
Location: 17570 - 19042 (+)
Type: pfam
Location: 17570 - 19042 (+)
Gene ID: k141_146131_12
Type: CAZyme
Location: 19136 - 20308 (+)
Type: CAZyme
Location: 19136 - 20308 (+)
Gene ID: k141_146131_13
Type: CAZyme
Location: 20319 - 22472 (+)
Type: CAZyme
Location: 20319 - 22472 (+)
Gene ID: k141_146131_14
Type: CAZyme
Location: 22493 - 24094 (+)
Type: CAZyme
Location: 22493 - 24094 (+)
Gene ID: k141_146131_15
Type: CAZyme
Location: 24150 - 26699 (-)
Type: CAZyme
Location: 24150 - 26699 (-)
Gene ID: k141_146131_16
Type: CAZyme
Location: 26715 - 29009 (-)
Type: CAZyme
Location: 26715 - 29009 (-)
Gene ID: k141_146131_17
Type: CAZyme
Location: 29049 - 30989 (-)
Type: CAZyme
Location: 29049 - 30989 (-)
Gene ID: k141_146131_18
Type: CAZyme
Location: 31014 - 33329 (-)
Type: CAZyme
Location: 31014 - 33329 (-)
Gene ID: k141_146131_19
Type: CAZyme
Location: 33347 - 35845 (-)
Type: CAZyme
Location: 33347 - 35845 (-)
Gene ID: k141_146131_20
Type: pfam
Location: 35874 - 37259 (-)
Type: pfam
Location: 35874 - 37259 (-)
Gene ID: k141_146131_21
Type: CAZyme
Location: 37265 - 38416 (-)
Type: CAZyme
Location: 37265 - 38416 (-)
Gene ID: k141_146131_22
Type: CAZyme
Location: 38579 - 40738 (-)
Type: CAZyme
Location: 38579 - 40738 (-)
Gene ID: k141_146131_23
Type: pfam
Location: 40866 - 41639 (-)
Type: pfam
Location: 40866 - 41639 (-)
Gene ID: k141_146131_24
Type: pfam
Location: 41658 - 43469 (-)
Type: pfam
Location: 41658 - 43469 (-)
Gene ID: k141_146131_25
Type: TC
Location: 43481 - 46882 (-)
Type: TC
Location: 43481 - 46882 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Tannerellaceae
Genus
Parabacteroides
Species
Parabacteroides faecis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.