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Cluster: CGMR067258_CGC16

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_146008 k141_146008_26 25426 28533 + 1.B.14.6.1
pfam k141_146008 k141_146008_27 28553 30286 + SusD_RagB | SusD-like_3
pfam k141_146008 k141_146008_28 30322 31716 + DUF4960
CAZyme k141_146008 k141_146008_29 31737 33317 + GH32
CAZyme k141_146008 k141_146008_30 33349 35166 + GH32
CAZyme k141_146008 k141_146008_31 35300 36949 + GH32
STP k141_146008 k141_146008_32 36961 37830 + PfkB
TC k141_146008 k141_146008_33 37833 38999 + 2.A.1.7.17
NULL(UNKNOWN) k141_146008 k141_146008_34 39087 39941 - NULL(UNKNOWN)
[View Structural Homologs]
pfam k141_146008 k141_146008_35 39977 41722 - SusD_RagB | SusD-like_3
TC k141_146008 k141_146008_36 41741 44749 - 1.B.14.6.1
TC k141_146008 k141_146008_37 44982 45215 + 1.B.14.6.2
Gene ID: k141_146008_26
Type: TC
Location: 25426 - 28533 (+)
Gene ID: k141_146008_27
Type: pfam
Location: 28553 - 30286 (+)
Gene ID: k141_146008_28
Type: pfam
Location: 30322 - 31716 (+)
Gene ID: k141_146008_29
Type: CAZyme
Location: 31737 - 33317 (+)
Gene ID: k141_146008_30
Type: CAZyme
Location: 33349 - 35166 (+)
Gene ID: k141_146008_31
Type: CAZyme
Location: 35300 - 36949 (+)
Gene ID: k141_146008_32
Type: STP
Location: 36961 - 37830 (+)
Gene ID: k141_146008_33
Type: TC
Location: 37833 - 38999 (+)
Gene ID: k141_146008_34
Type:
Location: 39087 - 39941 (-)
Gene ID: k141_146008_35
Type: pfam
Location: 39977 - 41722 (-)
Gene ID: k141_146008_36
Type: TC
Location: 41741 - 44749 (-)
Gene ID: k141_146008_37
Type: TC
Location: 44982 - 45215 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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