Cluster: CGMR067258_CGC12
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 3
- Substrate: pectin/alpha-glucan
- Genome ID: CGMR067258
- CGC Family ID: CGCFAM_00025
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_36300 | k141_36300_35 | 39845 | 41536 | + | CE19 |
| STP | k141_36300 | k141_36300_36 | 41546 | 42031 | + | AraC_binding |
| CAZyme | k141_36300 | k141_36300_37 | 42550 | 44394 | + | GH13_46 |
| CAZyme | k141_36300 | k141_36300_38 | 44419 | 46629 | + | GH97 |
| TC | k141_36300 | k141_36300_39 | 46687 | 49704 | + | 1.B.14.6.1 |
| TC | k141_36300 | k141_36300_40 | 49717 | 51348 | + | 8.A.46.1.1 |
Gene ID: k141_36300_35
Type: CAZyme
Location: 39845 - 41536 (+)
Type: CAZyme
Location: 39845 - 41536 (+)
Gene ID: k141_36300_36
Type: STP
Location: 41546 - 42031 (+)
Type: STP
Location: 41546 - 42031 (+)
Gene ID: k141_36300_37
Type: CAZyme
Location: 42550 - 44394 (+)
Type: CAZyme
Location: 42550 - 44394 (+)
Gene ID: k141_36300_38
Type: CAZyme
Location: 44419 - 46629 (+)
Type: CAZyme
Location: 44419 - 46629 (+)
Gene ID: k141_36300_39
Type: TC
Location: 46687 - 49704 (+)
Type: TC
Location: 46687 - 49704 (+)
Gene ID: k141_36300_40
Type: TC
Location: 49717 - 51348 (+)
Type: TC
Location: 49717 - 51348 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Tannerellaceae
Genus
Parabacteroides
Species
Parabacteroides faecis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.