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Cluster: CGMR066922_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_122760 k141_122760_2 599 1537 - GT2
TC k141_122760 k141_122760_3 1683 2546 + 9.B.126.2.5
pfam k141_122760 k141_122760_4 2565 3011 - Flavodoxin_1
pfam k141_122760 k141_122760_5 3090 3896 + RecX_HTH2 | RecX_HTH3 | RecX_HTH3 | RecX_HTH1
TC k141_122760 k141_122760_6 3898 5025 + 2.A.86.1.8
sulfatase k141_122760 k141_122760_7 5093 6670 + S1_97
peptidase k141_122760 k141_122760_8 6694 8115 + C69.001
TC k141_122760 k141_122760_9 8278 8820 + 3.A.1.25.4
TC k141_122760 k141_122760_10 9265 10716 + 3.A.1.3.20
TC k141_122760 k141_122760_11 10709 11452 + 3.A.1.3.9
Gene ID: k141_122760_2
Type: CAZyme
Location: 599 - 1537 (-)
Gene ID: k141_122760_3
Type: TC
Location: 1683 - 2546 (+)
Gene ID: k141_122760_4
Type: pfam
Location: 2565 - 3011 (-)
Gene ID: k141_122760_5
Type: pfam
Location: 3090 - 3896 (+)
Gene ID: k141_122760_6
Type: TC
Location: 3898 - 5025 (+)
Gene ID: k141_122760_7
Type: sulfatase
Location: 5093 - 6670 (+)
Gene ID: k141_122760_8
Type: peptidase
Location: 6694 - 8115 (+)
Gene ID: k141_122760_9
Type: TC
Location: 8278 - 8820 (+)
Gene ID: k141_122760_10
Type: TC
Location: 9265 - 10716 (+)
Gene ID: k141_122760_11
Type: TC
Location: 10709 - 11452 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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