Cluster: CGMR066887_CGC13
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR066887
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_213259 | k141_213259_2 | 408 | 1724 | - | 2.A.56.1.7 |
| TC | k141_213259 | k141_213259_3 | 1727 | 3049 | - | 2.A.56.1.7 |
| TC | k141_213259 | k141_213259_4 | 3049 | 3597 | - | 2.A.56.1.7 |
| TC | k141_213259 | k141_213259_5 | 3654 | 4640 | - | 2.A.56.1.7 |
| TF | k141_213259 | k141_213259_6 | 4776 | 5441 | + | GntR |
| CAZyme | k141_213259 | k141_213259_7 | 5484 | 7049 | - | AA4 |
Gene ID: k141_213259_2
Type: TC
Location: 408 - 1724 (-)
Type: TC
Location: 408 - 1724 (-)
Gene ID: k141_213259_3
Type: TC
Location: 1727 - 3049 (-)
Type: TC
Location: 1727 - 3049 (-)
Gene ID: k141_213259_4
Type: TC
Location: 3049 - 3597 (-)
Type: TC
Location: 3049 - 3597 (-)
Gene ID: k141_213259_5
Type: TC
Location: 3654 - 4640 (-)
Type: TC
Location: 3654 - 4640 (-)
Gene ID: k141_213259_6
Type: TF
Location: 4776 - 5441 (+)
Type: TF
Location: 4776 - 5441 (+)
Gene ID: k141_213259_7
Type: CAZyme
Location: 5484 - 7049 (-)
Type: CAZyme
Location: 5484 - 7049 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Rhodobacteraceae
Genus
Paracoccus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.