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Cluster: CGMR066793_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_231206 k141_231206_12 13051 14169 + GH103
pfam k141_231206 k141_231206_13 14266 15567 - ICL | ICL | PEP_mutase
NULL(UNKNOWN) k141_231206 k141_231206_14 16050 16178 - NULL(UNKNOWN)
[View Structural Homologs]
TC k141_231206 k141_231206_15 16190 17410 - 2.A.1.11.2
TC k141_231206 k141_231206_16 17512 18084 - 4.F.1.1.8
pfam k141_231206 k141_231206_17 18102 19931 - GIY-YIG | UVR | UvrC_RNaseH_dom | HHH_5 | UvrC_RNaseH
CAZyme k141_231206 k141_231206_18 19894 20949 - GH3
pfam k141_231206 k141_231206_19 20957 21388 - ACPS
pfam k141_231206 k141_231206_20 21406 21954 - RNase_T
TC k141_231206 k141_231206_21 22012 23277 + 9.B.1.1.2
Gene ID: k141_231206_12
Type: CAZyme
Location: 13051 - 14169 (+)
Gene ID: k141_231206_13
Type: pfam
Location: 14266 - 15567 (-)
Gene ID: k141_231206_14
Type:
Location: 16050 - 16178 (-)
Gene ID: k141_231206_15
Type: TC
Location: 16190 - 17410 (-)
Gene ID: k141_231206_16
Type: TC
Location: 17512 - 18084 (-)
Gene ID: k141_231206_17
Type: pfam
Location: 18102 - 19931 (-)
Gene ID: k141_231206_18
Type: CAZyme
Location: 19894 - 20949 (-)
Gene ID: k141_231206_19
Type: pfam
Location: 20957 - 21388 (-)
Gene ID: k141_231206_20
Type: pfam
Location: 21406 - 21954 (-)
Gene ID: k141_231206_21
Type: TC
Location: 22012 - 23277 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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