Cluster: CGMR066793_CGC4
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 3
- Substrate:
- Genome ID: CGMR066793
- CGC Family ID: CGCFAM_02511
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_19625 | k141_19625_147 | 159203 | 160336 | - | GT4 |
| CAZyme | k141_19625 | k141_19625_148 | 160346 | 163330 | - | GT4 |
| pfam | k141_19625 | k141_19625_149 | 163330 | 164511 | - | Methyltransf_21 |
| TC | k141_19625 | k141_19625_150 | 164511 | 165731 | - | 3.A.1.103.6 |
| TC | k141_19625 | k141_19625_151 | 165731 | 166531 | - | 3.A.1.103.6 |
| CAZyme | k141_19625 | k141_19625_152 | 166566 | 167729 | - | GT4 |
Gene ID: k141_19625_147
Type: CAZyme
Location: 159203 - 160336 (-)
Type: CAZyme
Location: 159203 - 160336 (-)
Gene ID: k141_19625_148
Type: CAZyme
Location: 160346 - 163330 (-)
Type: CAZyme
Location: 160346 - 163330 (-)
Gene ID: k141_19625_149
Type: pfam
Location: 163330 - 164511 (-)
Type: pfam
Location: 163330 - 164511 (-)
Gene ID: k141_19625_150
Type: TC
Location: 164511 - 165731 (-)
Type: TC
Location: 164511 - 165731 (-)
Gene ID: k141_19625_151
Type: TC
Location: 165731 - 166531 (-)
Type: TC
Location: 165731 - 166531 (-)
Gene ID: k141_19625_152
Type: CAZyme
Location: 166566 - 167729 (-)
Type: CAZyme
Location: 166566 - 167729 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Advenella_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.