Cluster: CGMR066793_CGC3
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: CGMR066793
- CGC Family ID: CGCFAM_00005
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_19625 | k141_19625_131 | 139609 | 141606 | - | 9.B.97.5.1 |
| TC | k141_19625 | k141_19625_132 | 141842 | 143161 | + | 9.A.40.2.2 |
| CAZyme | k141_19625 | k141_19625_133 | 143355 | 144485 | + | GT4 |
| CAZyme | k141_19625 | k141_19625_134 | 144482 | 145225 | + | CE4 |
| pfam | k141_19625 | k141_19625_135 | 145248 | 145793 | - | dTDP_sugar_isom |
| TC | k141_19625 | k141_19625_136 | 146145 | 147428 | + | 9.B.18.1.3 |
Gene ID: k141_19625_131
Type: TC
Location: 139609 - 141606 (-)
Type: TC
Location: 139609 - 141606 (-)
Gene ID: k141_19625_132
Type: TC
Location: 141842 - 143161 (+)
Type: TC
Location: 141842 - 143161 (+)
Gene ID: k141_19625_133
Type: CAZyme
Location: 143355 - 144485 (+)
Type: CAZyme
Location: 143355 - 144485 (+)
Gene ID: k141_19625_134
Type: CAZyme
Location: 144482 - 145225 (+)
Type: CAZyme
Location: 144482 - 145225 (+)
Gene ID: k141_19625_135
Type: pfam
Location: 145248 - 145793 (-)
Type: pfam
Location: 145248 - 145793 (-)
Gene ID: k141_19625_136
Type: TC
Location: 146145 - 147428 (+)
Type: TC
Location: 146145 - 147428 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Advenella_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.