Cluster: CGMR066793_CGC12
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR066793
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_149474 | k141_149474_10 | 12043 | 13212 | + | 9.B.146.1.6 |
| pfam | k141_149474 | k141_149474_11 | 13209 | 14735 | + | Mur_ligase_C | Mur_ligase_M | MurD-like_N |
| TC | k141_149474 | k141_149474_12 | 14732 | 15955 | + | 2.A.103.1.1 |
| CAZyme | k141_149474 | k141_149474_13 | 15948 | 17021 | + | GT28 |
Gene ID: k141_149474_10
Type: TC
Location: 12043 - 13212 (+)
Type: TC
Location: 12043 - 13212 (+)
Gene ID: k141_149474_11
Type: pfam
Location: 13209 - 14735 (+)
Type: pfam
Location: 13209 - 14735 (+)
Gene ID: k141_149474_12
Type: TC
Location: 14732 - 15955 (+)
Type: TC
Location: 14732 - 15955 (+)
Gene ID: k141_149474_13
Type: CAZyme
Location: 15948 - 17021 (+)
Type: CAZyme
Location: 15948 - 17021 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Advenella_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.