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Cluster: CGMR066400_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_827592 k141_827592_3 1426 3387 + GH20
TC k141_827592 k141_827592_4 3426 4169 - 2.A.102.2.5
CAZyme k141_827592 k141_827592_5 4285 6945 - CBM67 | GH78
CAZyme k141_827592 k141_827592_6 7104 10688 + GH2
TC k141_827592 k141_827592_7 10704 11924 + 1.A.23.4.5
NULL(UNKNOWN) k141_827592 k141_827592_8 12130 13428 + NULL(UNKNOWN)
[View Structural Homologs]
TC k141_827592 k141_827592_9 13473 15125 + 1.B.9.4.7
pfam k141_827592 k141_827592_10 15224 16072 + Exo_endo_phos
pfam k141_827592 k141_827592_11 16189 17673 + tRNA-synt_2b | HGTP_anticodon | ProRS-C_1
CAZyme k141_827592 k141_827592_12 17770 19995 + GH92
Gene ID: k141_827592_3
Type: CAZyme
Location: 1426 - 3387 (+)
Gene ID: k141_827592_4
Type: TC
Location: 3426 - 4169 (-)
Gene ID: k141_827592_5
Type: CAZyme
Location: 4285 - 6945 (-)
Gene ID: k141_827592_6
Type: CAZyme
Location: 7104 - 10688 (+)
Gene ID: k141_827592_7
Type: TC
Location: 10704 - 11924 (+)
Gene ID: k141_827592_8
Type:
Location: 12130 - 13428 (+)
Gene ID: k141_827592_9
Type: TC
Location: 13473 - 15125 (+)
Gene ID: k141_827592_10
Type: pfam
Location: 15224 - 16072 (+)
Gene ID: k141_827592_11
Type: pfam
Location: 16189 - 17673 (+)
Gene ID: k141_827592_12
Type: CAZyme
Location: 17770 - 19995 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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