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Cluster: CGMR066400_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_218454 k141_218454_44 43659 45014 - GH177
TC k141_218454 k141_218454_45 45068 46597 - 9.A.25.1.1
pfam k141_218454 k141_218454_46 47019 47474 + DUF2147
CAZyme k141_218454 k141_218454_47 47567 48277 + CE4
pfam k141_218454 k141_218454_48 48297 49373 + GDPD
TC k141_218454 k141_218454_49 49513 51201 - 4.C.1.1.4
TC k141_218454 k141_218454_50 51218 51925 - 9.B.31.1.2
TC k141_218454 k141_218454_51 52437 53438 + 2.A.115.1.1
pfam k141_218454 k141_218454_52 53447 54796 + UPF0004 | TRAM | Radical_SAM
TC k141_218454 k141_218454_53 54995 56758 + 1.B.14.3.1
Gene ID: k141_218454_44
Type: CAZyme
Location: 43659 - 45014 (-)
Gene ID: k141_218454_45
Type: TC
Location: 45068 - 46597 (-)
Gene ID: k141_218454_46
Type: pfam
Location: 47019 - 47474 (+)
Gene ID: k141_218454_47
Type: CAZyme
Location: 47567 - 48277 (+)
Gene ID: k141_218454_48
Type: pfam
Location: 48297 - 49373 (+)
Gene ID: k141_218454_49
Type: TC
Location: 49513 - 51201 (-)
Gene ID: k141_218454_50
Type: TC
Location: 51218 - 51925 (-)
Gene ID: k141_218454_51
Type: TC
Location: 52437 - 53438 (+)
Gene ID: k141_218454_52
Type: pfam
Location: 53447 - 54796 (+)
Gene ID: k141_218454_53
Type: TC
Location: 54995 - 56758 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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