Cluster: CGMR066400_CGC12
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: CGMR066400
- CGC Family ID: CGCFAM_08882
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_865837 | k141_865837_17 | 20647 | 22134 | - | 2.A.36.6.11 |
| NULL(UNKNOWN) | k141_865837 | k141_865837_18 | 22194 | 22694 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | k141_865837 | k141_865837_19 | 23298 | 24143 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | k141_865837 | k141_865837_20 | 24275 | 25672 | + | CE11 |
| pfam | k141_865837 | k141_865837_21 | 25681 | 26472 | + | Hexapep | Hexapep | Acetyltransf_11 | Hexapep_2 | Hexapep_2 |
| CAZyme | k141_865837 | k141_865837_22 | 26559 | 27464 | + | CE1 |
Gene ID: k141_865837_17
Type: TC
Location: 20647 - 22134 (-)
Type: TC
Location: 20647 - 22134 (-)
Gene ID: k141_865837_18
Type:
Location: 22194 - 22694 (-)
Type:
Location: 22194 - 22694 (-)
Gene ID: k141_865837_19
Type:
Location: 23298 - 24143 (-)
Type:
Location: 23298 - 24143 (-)
Gene ID: k141_865837_20
Type: CAZyme
Location: 24275 - 25672 (+)
Type: CAZyme
Location: 24275 - 25672 (+)
Gene ID: k141_865837_21
Type: pfam
Location: 25681 - 26472 (+)
Type: pfam
Location: 25681 - 26472 (+)
Gene ID: k141_865837_22
Type: CAZyme
Location: 26559 - 27464 (+)
Type: CAZyme
Location: 26559 - 27464 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Species
Alistipes sp017384185
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.