Cluster: CGMR066385_CGC5
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 3
- Substrate:
- Genome ID: CGMR066385
- CGC Family ID: CGCFAM_00397
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_140345 | k141_140345_17 | 14789 | 16663 | - | 9.B.18.2.1 |
| STP | k141_140345 | k141_140345_18 | 16804 | 17973 | - | Aminotran_1_2 |
| pfam | k141_140345 | k141_140345_19 | 18005 | 18661 | - | PglD_N |
| TC | k141_140345 | k141_140345_20 | 18654 | 19262 | - | 9.B.18.1.2 |
| CAZyme | k141_140345 | k141_140345_21 | 19263 | 20408 | - | GT4 |
| CAZyme | k141_140345 | k141_140345_22 | 20405 | 21592 | - | GT4 |
| pfam | k141_140345 | k141_140345_23 | 21589 | 22164 | - | Hexapep |
| CAZyme | k141_140345 | k141_140345_24 | 22154 | 23245 | - | GT4 |
Gene ID: k141_140345_17
Type: TC
Location: 14789 - 16663 (-)
Type: TC
Location: 14789 - 16663 (-)
Gene ID: k141_140345_18
Type: STP
Location: 16804 - 17973 (-)
Type: STP
Location: 16804 - 17973 (-)
Gene ID: k141_140345_19
Type: pfam
Location: 18005 - 18661 (-)
Type: pfam
Location: 18005 - 18661 (-)
Gene ID: k141_140345_20
Type: TC
Location: 18654 - 19262 (-)
Type: TC
Location: 18654 - 19262 (-)
Gene ID: k141_140345_21
Type: CAZyme
Location: 19263 - 20408 (-)
Type: CAZyme
Location: 19263 - 20408 (-)
Gene ID: k141_140345_22
Type: CAZyme
Location: 20405 - 21592 (-)
Type: CAZyme
Location: 20405 - 21592 (-)
Gene ID: k141_140345_23
Type: pfam
Location: 21589 - 22164 (-)
Type: pfam
Location: 21589 - 22164 (-)
Gene ID: k141_140345_24
Type: CAZyme
Location: 22154 - 23245 (-)
Type: CAZyme
Location: 22154 - 23245 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Moraxellaceae
Genus
Acinetobacter
Species
Acinetobacter indicus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.