Cluster: CGMR066385_CGC15
🧬 Cluster Details
- Gene Count: 13
- CAZyme Count: 2
- Substrate:
- Genome ID: CGMR066385
- CGC Family ID: CGCFAM_01063
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_21142 | k141_21142_134 | 138657 | 139769 | + | 3.A.1.10.2 |
| TC | k141_21142 | k141_21142_135 | 139794 | 140807 | + | 3.A.1.10.2 |
| TC | k141_21142 | k141_21142_136 | 140888 | 142516 | + | 3.A.1.10.2 |
| STP | k141_21142 | k141_21142_137 | 142905 | 143207 | + | AsnC_trans_reg |
| pfam | k141_21142 | k141_21142_138 | 143676 | 144209 | - | GreA_GreB | GreA_GreB_N |
| CAZyme | k141_21142 | k141_21142_139 | 144537 | 145652 | + | GH23 |
| pfam | k141_21142 | k141_21142_140 | 145724 | 146107 | - | SCP2 |
| pfam | k141_21142 | k141_21142_141 | 146324 | 147247 | - | ATP_bind_3 |
| CAZyme | k141_21142 | k141_21142_142 | 147756 | 148598 | + | GH23 |
| TC | k141_21142 | k141_21142_143 | 148714 | 149619 | + | 9.B.1.1.6 |
| pfam | k141_21142 | k141_21142_144 | 149714 | 150307 | - | DUF4112 |
| TC | k141_21142 | k141_21142_145 | 150396 | 151733 | - | 1.A.26.1.2 |
| TC | k141_21142 | k141_21142_146 | 151851 | 154943 | - | 2.A.6.2.4 |
Gene ID: k141_21142_134
Type: TC
Location: 138657 - 139769 (+)
Type: TC
Location: 138657 - 139769 (+)
Gene ID: k141_21142_135
Type: TC
Location: 139794 - 140807 (+)
Type: TC
Location: 139794 - 140807 (+)
Gene ID: k141_21142_136
Type: TC
Location: 140888 - 142516 (+)
Type: TC
Location: 140888 - 142516 (+)
Gene ID: k141_21142_137
Type: STP
Location: 142905 - 143207 (+)
Type: STP
Location: 142905 - 143207 (+)
Gene ID: k141_21142_138
Type: pfam
Location: 143676 - 144209 (-)
Type: pfam
Location: 143676 - 144209 (-)
Gene ID: k141_21142_139
Type: CAZyme
Location: 144537 - 145652 (+)
Type: CAZyme
Location: 144537 - 145652 (+)
Gene ID: k141_21142_140
Type: pfam
Location: 145724 - 146107 (-)
Type: pfam
Location: 145724 - 146107 (-)
Gene ID: k141_21142_141
Type: pfam
Location: 146324 - 147247 (-)
Type: pfam
Location: 146324 - 147247 (-)
Gene ID: k141_21142_142
Type: CAZyme
Location: 147756 - 148598 (+)
Type: CAZyme
Location: 147756 - 148598 (+)
Gene ID: k141_21142_143
Type: TC
Location: 148714 - 149619 (+)
Type: TC
Location: 148714 - 149619 (+)
Gene ID: k141_21142_144
Type: pfam
Location: 149714 - 150307 (-)
Type: pfam
Location: 149714 - 150307 (-)
Gene ID: k141_21142_145
Type: TC
Location: 150396 - 151733 (-)
Type: TC
Location: 150396 - 151733 (-)
Gene ID: k141_21142_146
Type: TC
Location: 151851 - 154943 (-)
Type: TC
Location: 151851 - 154943 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Moraxellaceae
Genus
Acinetobacter
Species
Acinetobacter indicus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.