Cluster: CGMR066211_CGC9
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR066211
- CGC Family ID: CGCFAM_00979
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_78895 | k141_78895_15 | 18118 | 18852 | - | 3.A.1.3.20 |
| TC | k141_78895 | k141_78895_16 | 18855 | 20444 | - | 3.A.1.3.20 |
| peptidase | k141_78895 | k141_78895_17 | 21048 | 22454 | - | M20.UPA |
| pfam | k141_78895 | k141_78895_18 | 22491 | 23234 | - | PseudoU_synth_2 | S4 |
| TC | k141_78895 | k141_78895_19 | 23298 | 24941 | - | 2.A.66.2.14 |
| pfam | k141_78895 | k141_78895_20 | 25037 | 27451 | - | tRNA-synt_1 | tRNA-synt_1 | Anticodon_1 | tRNA-synt_1g | tRNA-synt_1g | tRNA-synt_1_2 |
| CAZyme | k141_78895 | k141_78895_21 | 27766 | 29439 | - | GH73 |
Gene ID: k141_78895_15
Type: TC
Location: 18118 - 18852 (-)
Type: TC
Location: 18118 - 18852 (-)
Gene ID: k141_78895_16
Type: TC
Location: 18855 - 20444 (-)
Type: TC
Location: 18855 - 20444 (-)
Gene ID: k141_78895_17
Type: peptidase
Location: 21048 - 22454 (-)
Type: peptidase
Location: 21048 - 22454 (-)
Gene ID: k141_78895_18
Type: pfam
Location: 22491 - 23234 (-)
Type: pfam
Location: 22491 - 23234 (-)
Gene ID: k141_78895_19
Type: TC
Location: 23298 - 24941 (-)
Type: TC
Location: 23298 - 24941 (-)
Gene ID: k141_78895_20
Type: pfam
Location: 25037 - 27451 (-)
Type: pfam
Location: 25037 - 27451 (-)
Gene ID: k141_78895_21
Type: CAZyme
Location: 27766 - 29439 (-)
Type: CAZyme
Location: 27766 - 29439 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Vagococcaceae
Genus
Vagococcus
Species
Vagococcus silagei
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.