dbCAN Logo

Cluster: CGMR066211_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_91540 k141_91540_11 10744 11886 - 9.B.146.1.1
pfam k141_91540 k141_91540_12 12085 13230 + LytR_cpsA_psr
TC k141_91540 k141_91540_13 13441 14505 + 3.A.1.104.1
pfam k141_91540 k141_91540_14 14486 15610 + Glyphos_transf
CAZyme k141_91540 k141_91540_15 15616 16368 + GT26
TC k141_91540 k141_91540_16 16372 17193 + 3.A.1.104.1
pfam k141_91540 k141_91540_17 17214 18380 + Glyphos_transf
CAZyme k141_91540 k141_91540_18 18395 21973 + GT4
pfam k141_91540 k141_91540_19 21973 22917 + 3Beta_HSD | Epimerase | Polysacc_synt_2 | RmlD_sub_bind | NAD_binding_4 | NAD_binding_10 | GDP_Man_Dehyd
pfam k141_91540 k141_91540_20 23223 24332 + Epimerase_2
TC k141_91540 k141_91540_21 24418 25317 + 8.A.3.2.4
TC k141_91540 k141_91540_22 25342 26031 + 8.A.3.2.1
pfam k141_91540 k141_91540_23 26074 26859 + CpsB_CapC
TC k141_91540 k141_91540_24 26883 28697 + 9.B.18.2.1
pfam k141_91540 k141_91540_25 28716 29828 + Aminotran_1_2 | DegT_DnrJ_EryC1
TC k141_91540 k141_91540_26 29832 30443 + 9.B.18.1.2
pfam k141_91540 k141_91540_27 30448 31071 + PglD_N
CAZyme k141_91540 k141_91540_28 31075 32160 + GT4
Gene ID: k141_91540_11
Type: TC
Location: 10744 - 11886 (-)
Gene ID: k141_91540_12
Type: pfam
Location: 12085 - 13230 (+)
Gene ID: k141_91540_13
Type: TC
Location: 13441 - 14505 (+)
Gene ID: k141_91540_14
Type: pfam
Location: 14486 - 15610 (+)
Gene ID: k141_91540_15
Type: CAZyme
Location: 15616 - 16368 (+)
Gene ID: k141_91540_16
Type: TC
Location: 16372 - 17193 (+)
Gene ID: k141_91540_17
Type: pfam
Location: 17214 - 18380 (+)
Gene ID: k141_91540_18
Type: CAZyme
Location: 18395 - 21973 (+)
Gene ID: k141_91540_19
Type: pfam
Location: 21973 - 22917 (+)
Gene ID: k141_91540_20
Type: pfam
Location: 23223 - 24332 (+)
Gene ID: k141_91540_21
Type: TC
Location: 24418 - 25317 (+)
Gene ID: k141_91540_22
Type: TC
Location: 25342 - 26031 (+)
Gene ID: k141_91540_23
Type: pfam
Location: 26074 - 26859 (+)
Gene ID: k141_91540_24
Type: TC
Location: 26883 - 28697 (+)
Gene ID: k141_91540_25
Type: pfam
Location: 28716 - 29828 (+)
Gene ID: k141_91540_26
Type: TC
Location: 29832 - 30443 (+)
Gene ID: k141_91540_27
Type: pfam
Location: 30448 - 31071 (+)
Gene ID: k141_91540_28
Type: CAZyme
Location: 31075 - 32160 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota
→
Class
Bacilli
→
Order
Lactobacillales
→
Family
Vagococcaceae
→
Genus
Vagococcus
→
Species
Vagococcus silagei

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List