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Cluster: CGMR066211_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_28836 k141_28836_39 38711 40357 - 3.A.1.5.2
TC k141_28836 k141_28836_40 40708 41982 - 3.A.1.122.2
TC k141_28836 k141_28836_41 41982 42662 - 3.A.1.122.2
TC k141_28836 k141_28836_42 42919 44379 + 3.A.1.3.20
TC k141_28836 k141_28836_43 44366 45091 + 3.A.1.3.15
TF k141_28836 k141_28836_44 45180 46196 - LacI
pfam k141_28836 k141_28836_45 46227 47060 - Exo_endo_phos
TC k141_28836 k141_28836_46 47088 49256 - 4.A.1.1.11
CAZyme k141_28836 k141_28836_47 49469 51745 + GH65
Gene ID: k141_28836_39
Type: TC
Location: 38711 - 40357 (-)
Gene ID: k141_28836_40
Type: TC
Location: 40708 - 41982 (-)
Gene ID: k141_28836_41
Type: TC
Location: 41982 - 42662 (-)
Gene ID: k141_28836_42
Type: TC
Location: 42919 - 44379 (+)
Gene ID: k141_28836_43
Type: TC
Location: 44366 - 45091 (+)
Gene ID: k141_28836_44
Type: TF
Location: 45180 - 46196 (-)
Gene ID: k141_28836_45
Type: pfam
Location: 46227 - 47060 (-)
Gene ID: k141_28836_46
Type: TC
Location: 47088 - 49256 (-)
Gene ID: k141_28836_47
Type: CAZyme
Location: 49469 - 51745 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota
→
Class
Bacilli
→
Order
Lactobacillales
→
Family
Vagococcaceae
→
Genus
Vagococcus
→
Species
Vagococcus silagei

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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