Cluster: CGMR066211_CGC2
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR066211
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_30364 | k141_30364_5 | 2298 | 3038 | + | 3.A.1.120.6 |
| pfam | k141_30364 | k141_30364_6 | 3200 | 3976 | + | adh_short | KR | adh_short_C2 |
| CAZyme | k141_30364 | k141_30364_7 | 4159 | 5343 | + | GH3 |
| pfam | k141_30364 | k141_30364_8 | 5368 | 5886 | + | Acetyltransf_1 |
| TC | k141_30364 | k141_30364_9 | 5975 | 6577 | + | 3.A.1.31.1 |
| TC | k141_30364 | k141_30364_10 | 6580 | 7293 | + | 3.A.1.31.1 |
| TC | k141_30364 | k141_30364_11 | 7277 | 8698 | + | 3.A.1.31.2 |
Gene ID: k141_30364_5
Type: TC
Location: 2298 - 3038 (+)
Type: TC
Location: 2298 - 3038 (+)
Gene ID: k141_30364_6
Type: pfam
Location: 3200 - 3976 (+)
Type: pfam
Location: 3200 - 3976 (+)
Gene ID: k141_30364_7
Type: CAZyme
Location: 4159 - 5343 (+)
Type: CAZyme
Location: 4159 - 5343 (+)
Gene ID: k141_30364_8
Type: pfam
Location: 5368 - 5886 (+)
Type: pfam
Location: 5368 - 5886 (+)
Gene ID: k141_30364_9
Type: TC
Location: 5975 - 6577 (+)
Type: TC
Location: 5975 - 6577 (+)
Gene ID: k141_30364_10
Type: TC
Location: 6580 - 7293 (+)
Type: TC
Location: 6580 - 7293 (+)
Gene ID: k141_30364_11
Type: TC
Location: 7277 - 8698 (+)
Type: TC
Location: 7277 - 8698 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Vagococcaceae
Genus
Vagococcus
Species
Vagococcus silagei
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.