Cluster: CGMR066211_CGC17
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate: alpha-glucan
- Genome ID: CGMR066211
- CGC Family ID: CGCFAM_00725
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_113820 | k141_113820_10 | 8762 | 10426 | + | GH13_31 |
| CAZyme | k141_113820 | k141_113820_11 | 10456 | 12210 | + | CBM34 | GH13_20 |
| TC | k141_113820 | k141_113820_12 | 12306 | 13571 | + | 3.A.1.1.26 |
| TC | k141_113820 | k141_113820_13 | 13638 | 14939 | + | 3.A.1.1.26 |
| TC | k141_113820 | k141_113820_14 | 14941 | 15789 | + | 3.A.1.1.26 |
Gene ID: k141_113820_10
Type: CAZyme
Location: 8762 - 10426 (+)
Type: CAZyme
Location: 8762 - 10426 (+)
Gene ID: k141_113820_11
Type: CAZyme
Location: 10456 - 12210 (+)
Type: CAZyme
Location: 10456 - 12210 (+)
Gene ID: k141_113820_12
Type: TC
Location: 12306 - 13571 (+)
Type: TC
Location: 12306 - 13571 (+)
Gene ID: k141_113820_13
Type: TC
Location: 13638 - 14939 (+)
Type: TC
Location: 13638 - 14939 (+)
Gene ID: k141_113820_14
Type: TC
Location: 14941 - 15789 (+)
Type: TC
Location: 14941 - 15789 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Vagococcaceae
Genus
Vagococcus
Species
Vagococcus silagei
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.